Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBFD1O14562 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.07■□□□□ 0.32
UBFD1O14562 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBFD1O14562 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.07■□□□□ 0.32
UBFD1O14562 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBFD1O14562 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBFD1O14562 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBFD1O14562 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBFD1O14562 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
UBFD1O14562 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.06■□□□□ 0.32
UBFD1O14562 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.06■□□□□ 0.32
UBFD1O14562 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UBFD1O14562 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.06■□□□□ 0.32
UBFD1O14562 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.06■□□□□ 0.32
UBFD1O14562 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 AC097374.2-201ENST00000618617 1306 ntBASIC17.06■□□□□ 0.32
UBFD1O14562 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
UBFD1O14562 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 RNF152P1-201ENST00000397754 604 ntBASIC17.06■□□□□ 0.32
UBFD1O14562 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.06■□□□□ 0.32
UBFD1O14562 KRT18P57-201ENST00000443599 1254 ntBASIC17.06■□□□□ 0.32
UBFD1O14562 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.06■□□□□ 0.32
UBFD1O14562 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
UBFD1O14562 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UBFD1O14562 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.06■□□□□ 0.32
UBFD1O14562 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.06■□□□□ 0.32
UBFD1O14562 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.06■□□□□ 0.32
UBFD1O14562 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.06■□□□□ 0.32
UBFD1O14562 Z83836.1-201ENST00000624605 1642 ntBASIC17.06■□□□□ 0.32
UBFD1O14562 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.06■□□□□ 0.32
UBFD1O14562 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBFD1O14562 AC092053.1-201ENST00000605787 1936 ntBASIC17.06■□□□□ 0.32
UBFD1O14562 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
UBFD1O14562 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
UBFD1O14562 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBFD1O14562 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.05■□□□□ 0.32
UBFD1O14562 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.05■□□□□ 0.32
UBFD1O14562 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 FLJ38576-201ENST00000623820 2459 ntBASIC17.05■□□□□ 0.32
UBFD1O14562 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBFD1O14562 COX5BP2-201ENST00000392354 334 ntBASIC17.05■□□□□ 0.32
UBFD1O14562 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.05■□□□□ 0.32
UBFD1O14562 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.05■□□□□ 0.32
UBFD1O14562 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.05■□□□□ 0.32
UBFD1O14562 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.05■□□□□ 0.32
UBFD1O14562 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.05■□□□□ 0.32
UBFD1O14562 AC002558.1-201ENST00000488906 803 ntBASIC17.05■□□□□ 0.32
UBFD1O14562 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.05■□□□□ 0.32
UBFD1O14562 AC073912.3-201ENST00000624414 853 ntBASIC17.05■□□□□ 0.32
UBFD1O14562 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.05■□□□□ 0.32
UBFD1O14562 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
UBFD1O14562 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBFD1O14562 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.05■□□□□ 0.32
UBFD1O14562 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
UBFD1O14562 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 AC005915.1-201ENST00000624912 2018 ntBASIC17.04■□□□□ 0.32
UBFD1O14562 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.04■□□□□ 0.32
UBFD1O14562 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBFD1O14562 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.04■□□□□ 0.32
UBFD1O14562 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms