Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 Z99916.2-201ENST00000604037 246 ntBASIC16.29■□□□□ 0.2
TNFRSF11BO00300 AL157888.1-201ENST00000631930 593 ntBASIC16.29■□□□□ 0.2
TNFRSF11BO00300 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 PCDHB19P-201ENST00000570871 2371 ntBASIC16.29■□□□□ 0.2
TNFRSF11BO00300 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFRSF11BO00300 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 EGLN1P1-201ENST00000531623 762 ntBASIC16.28■□□□□ 0.2
TNFRSF11BO00300 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 BX276092.7-203ENST00000637198 1536 ntBASIC16.28■□□□□ 0.2
TNFRSF11BO00300 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFRSF11BO00300 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 INGX-201ENST00000359239 846 ntBASIC16.27■□□□□ 0.2
TNFRSF11BO00300 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 AC128688.1-201ENST00000487626 519 ntBASIC16.27■□□□□ 0.2
TNFRSF11BO00300 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 AL512604.3-201ENST00000569583 964 ntBASIC16.27■□□□□ 0.2
TNFRSF11BO00300 MIR4785-201ENST00000585005 73 ntBASIC16.27■□□□□ 0.2
TNFRSF11BO00300 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNFRSF11BO00300 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TNFRSF11BO00300 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNFRSF11BO00300 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms