Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.9□□□□□ -0.34
NACAE9PAV3 AC139713.2-201ENST00000641328 2723 ntBASIC12.9□□□□□ -0.34
NACAE9PAV3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.9□□□□□ -0.34
NACAE9PAV3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NACAE9PAV3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.9□□□□□ -0.34
NACAE9PAV3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NACAE9PAV3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NACAE9PAV3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.9□□□□□ -0.34
NACAE9PAV3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.9□□□□□ -0.34
NACAE9PAV3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.9□□□□□ -0.34
NACAE9PAV3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.9□□□□□ -0.34
NACAE9PAV3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.9□□□□□ -0.34
NACAE9PAV3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
NACAE9PAV3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NACAE9PAV3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 HLA-F-220ENST00000434407 884 ntBASIC12.9□□□□□ -0.34
NACAE9PAV3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.9□□□□□ -0.34
NACAE9PAV3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.9□□□□□ -0.34
NACAE9PAV3 GCSHP2-201ENST00000560971 527 ntBASIC12.9□□□□□ -0.34
NACAE9PAV3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
NACAE9PAV3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
NACAE9PAV3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NACAE9PAV3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
NACAE9PAV3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NACAE9PAV3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 AC008894.3-201ENST00000624324 3103 ntBASIC12.89□□□□□ -0.35
NACAE9PAV3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.89□□□□□ -0.35
NACAE9PAV3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.89□□□□□ -0.35
NACAE9PAV3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.89□□□□□ -0.35
NACAE9PAV3 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.89□□□□□ -0.35
NACAE9PAV3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
NACAE9PAV3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.89□□□□□ -0.35
NACAE9PAV3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NACAE9PAV3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.89□□□□□ -0.35
NACAE9PAV3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
NACAE9PAV3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.89□□□□□ -0.35
NACAE9PAV3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms