Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 AC007292.2-201ENST00000593524 1812 ntBASIC13.49□□□□□ -0.25
COLCA2A8K830 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
COLCA2A8K830 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.49□□□□□ -0.25
COLCA2A8K830 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC13.49□□□□□ -0.25
COLCA2A8K830 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.49□□□□□ -0.25
COLCA2A8K830 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
COLCA2A8K830 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COLCA2A8K830 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.49□□□□□ -0.25
COLCA2A8K830 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COLCA2A8K830 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.49□□□□□ -0.25
COLCA2A8K830 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
COLCA2A8K830 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.49□□□□□ -0.25
COLCA2A8K830 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.49□□□□□ -0.25
COLCA2A8K830 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.49□□□□□ -0.25
COLCA2A8K830 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COLCA2A8K830 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COLCA2A8K830 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COLCA2A8K830 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.49□□□□□ -0.25
COLCA2A8K830 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.49□□□□□ -0.25
COLCA2A8K830 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
COLCA2A8K830 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COLCA2A8K830 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.49□□□□□ -0.25
COLCA2A8K830 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COLCA2A8K830 AC079781.5-202ENST00000641784 3743 ntBASIC13.49□□□□□ -0.25
COLCA2A8K830 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.49□□□□□ -0.25
COLCA2A8K830 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.48□□□□□ -0.25
COLCA2A8K830 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
COLCA2A8K830 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.48□□□□□ -0.25
COLCA2A8K830 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.48□□□□□ -0.25
COLCA2A8K830 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
COLCA2A8K830 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.48□□□□□ -0.25
COLCA2A8K830 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.48□□□□□ -0.25
COLCA2A8K830 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.48□□□□□ -0.25
COLCA2A8K830 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 AC106881.1-201ENST00000605849 3329 ntBASIC13.48□□□□□ -0.25
COLCA2A8K830 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.48□□□□□ -0.25
COLCA2A8K830 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 GUK1-208ENST00000366728 842 ntTSL 2 BASIC13.48□□□□□ -0.25
COLCA2A8K830 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
COLCA2A8K830 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.48□□□□□ -0.25
COLCA2A8K830 AL591742.1-201ENST00000604433 565 ntBASIC13.48□□□□□ -0.25
COLCA2A8K830 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
COLCA2A8K830 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 AC006538.1-201ENST00000567905 1585 ntBASIC13.48□□□□□ -0.25
COLCA2A8K830 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
COLCA2A8K830 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.48□□□□□ -0.25
COLCA2A8K830 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
COLCA2A8K830 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.48□□□□□ -0.25
COLCA2A8K830 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.48□□□□□ -0.25
COLCA2A8K830 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
COLCA2A8K830 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
COLCA2A8K830 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COLCA2A8K830 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
COLCA2A8K830 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
COLCA2A8K830 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
COLCA2A8K830 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
COLCA2A8K830 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
COLCA2A8K830 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
COLCA2A8K830 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
COLCA2A8K830 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
COLCA2A8K830 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COLCA2A8K830 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COLCA2A8K830 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
COLCA2A8K830 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COLCA2A8K830 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COLCA2A8K830 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
COLCA2A8K830 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
COLCA2A8K830 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.47□□□□□ -0.25
COLCA2A8K830 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.47□□□□□ -0.25
COLCA2A8K830 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COLCA2A8K830 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COLCA2A8K830 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.47□□□□□ -0.25
COLCA2A8K830 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms