Protein–RNA interactions for Protein: A5D8V6

VPS37C, Vacuolar protein sorting-associated protein 37C, humanhuman

Predicted RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37CA5D8V6 LYSMD4-203ENST00000378904 2122 ntBASIC20.54■□□□□ 0.88
VPS37CA5D8V6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 IGHGP-201ENST00000390555 1178 ntBASIC20.54■□□□□ 0.88
VPS37CA5D8V6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 AC005363.2-201ENST00000618631 242 ntBASIC20.54■□□□□ 0.88
VPS37CA5D8V6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37CA5D8V6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 AC117947.1-201ENST00000427448 529 ntBASIC20.53■□□□□ 0.88
VPS37CA5D8V6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
VPS37CA5D8V6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 AL353692.3-201ENST00000407031 1396 ntBASIC20.52■□□□□ 0.88
VPS37CA5D8V6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 BX664615.1-201ENST00000443558 458 ntBASIC20.52■□□□□ 0.88
VPS37CA5D8V6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 KRT18P38-201ENST00000449496 1282 ntBASIC20.52■□□□□ 0.88
VPS37CA5D8V6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.52■□□□□ 0.88
VPS37CA5D8V6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS37CA5D8V6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.52■□□□□ 0.87
VPS37CA5D8V6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.52■□□□□ 0.87
VPS37CA5D8V6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VPS37CA5D8V6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
VPS37CA5D8V6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS37CA5D8V6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS37CA5D8V6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS37CA5D8V6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms