Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.04■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 POM121L3P-201ENST00000419331 1163 ntBASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 EMBP1-201ENST00000458200 901 ntBASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 BNIP3P18-201ENST00000593976 575 ntBASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 TP73-AS1-210ENST00000637775 1455 ntBASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 LINC01711-201ENST00000598340 967 ntBASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.02■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.02■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.02■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNFSF12-TNFSF13A0A0A6YY99 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms