Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 AP003041.3-201ENST00000527151 707 ntBASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 LINC00167-201ENST00000530583 1419 ntBASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 AC079328.2-201ENST00000561241 3354 ntBASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 RPPH1-201ENST00000516869 333 ntBASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV18A0A075B6X5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 AC005915.1-201ENST00000624912 2018 ntBASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 DDX43P3-201ENST00000441064 443 ntBASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 AC128676.1-201ENST00000454392 318 ntBASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 AC008687.5-201ENST00000593746 558 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms