Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.09■□□□□ 0.81
CLIC4Q9Y696 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 NKILA-202ENST00000614771 2598 ntBASIC20.08■□□□□ 0.81
CLIC4Q9Y696 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 LINC01238-205ENST00000567549 1107 ntBASIC20.08■□□□□ 0.81
CLIC4Q9Y696 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 AC019129.2-201ENST00000609837 1235 ntBASIC20.08■□□□□ 0.81
CLIC4Q9Y696 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.08■□□□□ 0.81
CLIC4Q9Y696 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 AC125634.1-201ENST00000438758 1403 ntBASIC20.08■□□□□ 0.8
CLIC4Q9Y696 AC016396.2-201ENST00000562575 1417 ntBASIC20.08■□□□□ 0.8
CLIC4Q9Y696 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC4Q9Y696 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 AC011676.5-201ENST00000624864 2660 ntBASIC20.07■□□□□ 0.8
CLIC4Q9Y696 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CLIC4Q9Y696 AC116353.5-201ENST00000638148 1699 ntBASIC20.07■□□□□ 0.8
CLIC4Q9Y696 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC4Q9Y696 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms