Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 FOSL1P1-201ENST00000511041 816 ntBASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 AC135776.1-201ENST00000319817 2481 ntBASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 AD000864.1-201ENST00000624076 2295 ntBASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 POM121L3P-201ENST00000419331 1163 ntBASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 KRT16P4-201ENST00000453883 522 ntBASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 AC011840.4-201ENST00000578471 627 ntBASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB6Q9Y5F9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 KRT8P10-201ENST00000450021 1447 ntBASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 AL732292.2-201ENST00000609649 430 ntBASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB6Q9Y5F9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms