Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
PCDHB2Q9Y5E7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB2Q9Y5E7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB2Q9Y5E7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB2Q9Y5E7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB2Q9Y5E7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 AC079776.2-201ENST00000641154 1609 ntBASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 AC103564.2-201ENST00000432853 1299 ntBASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 AC134043.2-201ENST00000624206 2238 ntBASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 GNAS-203ENST00000306120 1878 ntBASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB2Q9Y5E7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 HLA-J-201ENST00000462773 1622 ntBASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 BX005266.1-201ENST00000473402 457 ntBASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 AC012640.2-201ENST00000561606 901 ntBASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 AC106730.1-201ENST00000566722 1090 ntBASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 AC023511.2-201ENST00000618803 211 ntBASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB2Q9Y5E7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 SIRPAP1-201ENST00000448467 1770 ntBASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 AC100803.2-201ENST00000562459 1963 ntBASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB2Q9Y5E7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms