Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB9Q9Y5E1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHB9Q9Y5E1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
PCDHB9Q9Y5E1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
PCDHB9Q9Y5E1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHB9Q9Y5E1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHB9Q9Y5E1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 RCN1P2-201ENST00000398357 915 ntBASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 DDX43P3-201ENST00000441064 443 ntBASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 AC139887.3-201ENST00000568585 713 ntBASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB9Q9Y5E1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 AC011467.2-201ENST00000598425 242 ntBASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 AC114341.1-201ENST00000618070 349 ntBASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 AC148477.8-201ENST00000624298 468 ntBASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB9Q9Y5E1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 AC243591.1-201ENST00000452967 1364 ntBASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms