Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q9Y3F1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.33■□□□□ 0.68
Q9Y3F1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Q9Y3F1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
Q9Y3F1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9Y3F1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q9Y3F1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9Y3F1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9Y3F1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.33■□□□□ 0.68
Q9Y3F1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q9Y3F1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9Y3F1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
Q9Y3F1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9Y3F1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q9Y3F1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q9Y3F1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
Q9Y3F1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Q9Y3F1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Q9Y3F1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 AL139400.1-201ENST00000366220 510 ntBASIC19.32■□□□□ 0.68
Q9Y3F1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.32■□□□□ 0.68
Q9Y3F1 MIR770-201ENST00000390219 98 ntBASIC19.32■□□□□ 0.68
Q9Y3F1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 AC004461.1-201ENST00000412461 403 ntBASIC19.32■□□□□ 0.68
Q9Y3F1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 AL513480.1-201ENST00000451731 511 ntBASIC19.32■□□□□ 0.68
Q9Y3F1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.32■□□□□ 0.68
Q9Y3F1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.32■□□□□ 0.68
Q9Y3F1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.32■□□□□ 0.68
Q9Y3F1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.32■□□□□ 0.68
Q9Y3F1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.32■□□□□ 0.68
Q9Y3F1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.32■□□□□ 0.68
Q9Y3F1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.32■□□□□ 0.68
Q9Y3F1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9Y3F1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
Q9Y3F1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9Y3F1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Q9Y3F1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.31■□□□□ 0.68
Q9Y3F1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Q9Y3F1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9Y3F1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Q9Y3F1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9Y3F1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9Y3F1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9Y3F1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Q9Y3F1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9Y3F1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.31■□□□□ 0.68
Q9Y3F1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.31■□□□□ 0.68
Q9Y3F1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.31■□□□□ 0.68
Q9Y3F1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9Y3F1 AL139327.4-201ENST00000612362 153 ntBASIC19.31■□□□□ 0.68
Q9Y3F1 LINC01451-201ENST00000623792 534 ntBASIC19.31■□□□□ 0.68
Q9Y3F1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9Y3F1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.31■□□□□ 0.68
Q9Y3F1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.31■□□□□ 0.68
Q9Y3F1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Q9Y3F1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Q9Y3F1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
Q9Y3F1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9Y3F1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9Y3F1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.31■□□□□ 0.68
Q9Y3F1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9Y3F1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Q9Y3F1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.3■□□□□ 0.68
Q9Y3F1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q9Y3F1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.3■□□□□ 0.68
Q9Y3F1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9Y3F1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q9Y3F1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q9Y3F1 REXO1L11P-201ENST00000620964 1927 ntBASIC19.3■□□□□ 0.68
Q9Y3F1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.3■□□□□ 0.68
Q9Y3F1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Q9Y3F1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Q9Y3F1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.3■□□□□ 0.68
Q9Y3F1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q9Y3F1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.3■□□□□ 0.68
Q9Y3F1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.3■□□□□ 0.68
Q9Y3F1 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.3■□□□□ 0.68
Q9Y3F1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q9Y3F1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Q9Y3F1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.3■□□□□ 0.68
Q9Y3F1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.3■□□□□ 0.68
Q9Y3F1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q9Y3F1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Q9Y3F1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9Y3F1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q9Y3F1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9Y3F1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q9Y3F1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms