Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 NME2P1-201ENST00000426182 414 ntBASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 SLC25A39P2-201ENST00000537614 270 ntBASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 SPDYE22P-201ENST00000582158 798 ntBASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 AC099522.2-201ENST00000607001 744 ntBASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 AC025048.6-201ENST00000634326 1161 ntBASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H4Q9UPT8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 KRT8P48-201ENST00000515599 1220 ntBASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H4Q9UPT8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 AL671277.1-201ENST00000429656 993 ntBASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 AL592309.1-201ENST00000443127 649 ntBASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.16■□□□□ 0.98
ZC3H4Q9UPT8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H4Q9UPT8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H4Q9UPT8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.15■□□□□ 0.98
ZC3H4Q9UPT8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H4Q9UPT8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H4Q9UPT8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.15■□□□□ 0.98
ZC3H4Q9UPT8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H4Q9UPT8 AC026471.1-201ENST00000564629 3026 ntBASIC21.15■□□□□ 0.98
ZC3H4Q9UPT8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H4Q9UPT8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H4Q9UPT8 AC005332.7-201ENST00000614046 2005 ntBASIC21.15■□□□□ 0.98
ZC3H4Q9UPT8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H4Q9UPT8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H4Q9UPT8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms