Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 LINC00304-203ENST00000565008 1864 ntBASIC18.58■□□□□ 0.57
CDH9Q9ULB4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH9Q9ULB4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 AL049840.3-201ENST00000602669 611 ntBASIC18.58■□□□□ 0.56
CDH9Q9ULB4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH9Q9ULB4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 AC139887.3-201ENST00000568585 713 ntBASIC18.57■□□□□ 0.56
CDH9Q9ULB4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 BX640515.1-201ENST00000617215 977 ntBASIC18.57■□□□□ 0.56
CDH9Q9ULB4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 AC008735.5-201ENST00000623544 497 ntBASIC18.57■□□□□ 0.56
CDH9Q9ULB4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.57■□□□□ 0.56
CDH9Q9ULB4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH9Q9ULB4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 HLA-J-201ENST00000462773 1622 ntBASIC18.56■□□□□ 0.56
CDH9Q9ULB4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 AL589182.2-201ENST00000619332 1049 ntBASIC18.56■□□□□ 0.56
CDH9Q9ULB4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CDH9Q9ULB4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms