Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC42EP3Q9UKI2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42EP3Q9UKI2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42EP3Q9UKI2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC42EP3Q9UKI2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 AC068472.1-201ENST00000474589 881 ntBASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 AC105339.3-201ENST00000560043 636 ntBASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 AC009154.2-201ENST00000621177 724 ntBASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42EP3Q9UKI2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 PRORSD1P-202ENST00000563365 2154 ntBASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 IRX1P1-201ENST00000438849 1838 ntBASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 MIR149-201ENST00000384879 89 ntBASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 KRT18P41-201ENST00000518924 1277 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms