Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 RHOQP3-201ENST00000437982 621 ntBASIC17.41■□□□□ 0.38
NCDNQ9UBB6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 AC068137.2-201ENST00000605408 478 ntBASIC17.41■□□□□ 0.38
NCDNQ9UBB6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.41■□□□□ 0.38
NCDNQ9UBB6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 CNN2P2-201ENST00000443536 909 ntBASIC17.4■□□□□ 0.38
NCDNQ9UBB6 CNN2P3-201ENST00000450201 906 ntBASIC17.4■□□□□ 0.38
NCDNQ9UBB6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 AC015911.4-201ENST00000588022 1070 ntBASIC17.4■□□□□ 0.38
NCDNQ9UBB6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 AL359881.2-201ENST00000602973 570 ntBASIC17.4■□□□□ 0.38
NCDNQ9UBB6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 AL136317.3-201ENST00000618497 906 ntBASIC17.4■□□□□ 0.38
NCDNQ9UBB6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 AL805961.1-202ENST00000641562 540 ntBASIC17.4■□□□□ 0.38
NCDNQ9UBB6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCDNQ9UBB6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
NCDNQ9UBB6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
NCDNQ9UBB6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 TFAMP1-201ENST00000412727 736 ntBASIC17.39■□□□□ 0.37
NCDNQ9UBB6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 475.3 ms