Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 KRT8P47-201ENST00000604727 1398 ntBASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 PRELID1P1-202ENST00000567272 903 ntBASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 LINC01711-201ENST00000598340 967 ntBASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 AL121772.3-201ENST00000610840 674 ntBASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 BX276092.7-203ENST00000637198 1536 ntBASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PARPBPQ9NWS1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 KRT16P4-201ENST00000453883 522 ntBASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 AP005901.3-202ENST00000581653 237 ntBASIC15.77■□□□□ 0.12
PARPBPQ9NWS1 AC005336.2-201ENST00000593183 939 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms