Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 TSPY21P-201ENST00000433481 731 ntBASIC20.83■□□□□ 0.93
RTN4Q9NQC3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 AL138781.1-201ENST00000566567 1274 ntBASIC20.83■□□□□ 0.93
RTN4Q9NQC3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTN4Q9NQC3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTN4Q9NQC3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
RTN4Q9NQC3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RTN4Q9NQC3 AL603756.1-201ENST00000606511 2163 ntBASIC20.83■□□□□ 0.92
RTN4Q9NQC3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.83■□□□□ 0.92
RTN4Q9NQC3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RTN4Q9NQC3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.83■□□□□ 0.92
RTN4Q9NQC3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.83■□□□□ 0.92
RTN4Q9NQC3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RTN4Q9NQC3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC20.83■□□□□ 0.92
RTN4Q9NQC3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 RPS14P4-201ENST00000415880 418 ntBASIC20.82■□□□□ 0.92
RTN4Q9NQC3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC20.82■□□□□ 0.92
RTN4Q9NQC3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 AC079781.5-202ENST00000641784 3743 ntBASIC20.81■□□□□ 0.92
RTN4Q9NQC3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 TSPY23P-201ENST00000440136 739 ntBASIC20.81■□□□□ 0.92
RTN4Q9NQC3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms