Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK3Q9H422 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HIPK3Q9H422 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK3Q9H422 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK3Q9H422 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HIPK3Q9H422 AC120498.9-201ENST00000339021 3867 ntBASIC19.15■□□□□ 0.66
HIPK3Q9H422 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HIPK3Q9H422 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.15■□□□□ 0.66
HIPK3Q9H422 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.15■□□□□ 0.66
HIPK3Q9H422 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK3Q9H422 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK3Q9H422 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HIPK3Q9H422 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
HIPK3Q9H422 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HIPK3Q9H422 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
HIPK3Q9H422 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
HIPK3Q9H422 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK3Q9H422 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
HIPK3Q9H422 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.14■□□□□ 0.65
HIPK3Q9H422 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
HIPK3Q9H422 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
HIPK3Q9H422 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK3Q9H422 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK3Q9H422 AC244107.1-201ENST00000442033 332 ntBASIC19.14■□□□□ 0.65
HIPK3Q9H422 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.14■□□□□ 0.65
HIPK3Q9H422 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.14■□□□□ 0.65
HIPK3Q9H422 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.14■□□□□ 0.65
HIPK3Q9H422 AC022145.2-201ENST00000598203 171 ntBASIC19.14■□□□□ 0.65
HIPK3Q9H422 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK3Q9H422 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK3Q9H422 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK3Q9H422 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK3Q9H422 BX276092.7-203ENST00000637198 1536 ntBASIC19.14■□□□□ 0.65
HIPK3Q9H422 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HIPK3Q9H422 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.14■□□□□ 0.65
HIPK3Q9H422 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK3Q9H422 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.14■□□□□ 0.65
HIPK3Q9H422 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK3Q9H422 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK3Q9H422 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK3Q9H422 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK3Q9H422 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK3Q9H422 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK3Q9H422 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 AC023141.5-201ENST00000458585 616 ntBASIC19.13■□□□□ 0.65
HIPK3Q9H422 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK3Q9H422 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 AC109322.1-201ENST00000524499 1264 ntBASIC19.13■□□□□ 0.65
HIPK3Q9H422 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 AC005498.2-205ENST00000593218 784 ntBASIC19.13■□□□□ 0.65
HIPK3Q9H422 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK3Q9H422 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK3Q9H422 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK3Q9H422 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK3Q9H422 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK3Q9H422 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK3Q9H422 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HIPK3Q9H422 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK3Q9H422 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
HIPK3Q9H422 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK3Q9H422 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.12■□□□□ 0.65
HIPK3Q9H422 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.12■□□□□ 0.65
HIPK3Q9H422 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK3Q9H422 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
HIPK3Q9H422 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.12■□□□□ 0.65
HIPK3Q9H422 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.12■□□□□ 0.65
HIPK3Q9H422 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK3Q9H422 AL031598.1-201ENST00000561511 1773 ntBASIC19.12■□□□□ 0.65
HIPK3Q9H422 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HIPK3Q9H422 AL121761.2-201ENST00000598007 1648 ntBASIC19.12■□□□□ 0.65
HIPK3Q9H422 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK3Q9H422 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK3Q9H422 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK3Q9H422 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.12■□□□□ 0.65
HIPK3Q9H422 DDX43P3-201ENST00000441064 443 ntBASIC19.12■□□□□ 0.65
HIPK3Q9H422 PAWRP1-201ENST00000451083 565 ntBASIC19.12■□□□□ 0.65
HIPK3Q9H422 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.12■□□□□ 0.65
HIPK3Q9H422 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.12■□□□□ 0.65
HIPK3Q9H422 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
HIPK3Q9H422 LINC00628-201ENST00000628516 1289 ntBASIC19.12■□□□□ 0.65
HIPK3Q9H422 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HIPK3Q9H422 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.12■□□□□ 0.65
HIPK3Q9H422 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.12■□□□□ 0.65
HIPK3Q9H422 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.11■□□□□ 0.65
HIPK3Q9H422 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK3Q9H422 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms