Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 MCCD1P1-208ENST00000445732 328 ntBASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 AC233263.1-201ENST00000578059 224 ntBASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 KRT16P1-201ENST00000399124 1418 ntBASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 AC009102.3-201ENST00000623118 1491 ntBASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP4Q9BWG4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 AL163051.1-201ENST00000569214 1512 ntBASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 AC103702.1-201ENST00000548801 2630 ntBASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 MIR149-201ENST00000384879 89 ntBASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 PCDHB17P-201ENST00000539533 2393 ntBASIC13.34□□□□□ -0.27
SSBP4Q9BWG4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP4Q9BWG4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP4Q9BWG4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP4Q9BWG4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.33□□□□□ -0.27
SSBP4Q9BWG4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.33□□□□□ -0.27
SSBP4Q9BWG4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP4Q9BWG4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP4Q9BWG4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP4Q9BWG4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.33□□□□□ -0.28
SSBP4Q9BWG4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP4Q9BWG4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP4Q9BWG4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP4Q9BWG4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP4Q9BWG4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms