Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ESPNP-201ENST00000270691 2015 ntBASIC10.53□□□□□ -0.72
LIMD2Q9BT23 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 AC022898.2-201ENST00000616822 1312 ntBASIC10.53□□□□□ -0.72
LIMD2Q9BT23 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LIMD2Q9BT23 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LIMD2Q9BT23 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 AC010947.1-201ENST00000623454 693 ntBASIC10.52□□□□□ -0.73
LIMD2Q9BT23 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 AC093677.2-201ENST00000600169 1863 ntBASIC10.52□□□□□ -0.73
LIMD2Q9BT23 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms