Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CASD1Q96PB1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CASD1Q96PB1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CASD1Q96PB1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASD1Q96PB1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASD1Q96PB1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 CXCL1P1-201ENST00000502804 216 ntBASIC18.66■□□□□ 0.58
CASD1Q96PB1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 AL135999.2-201ENST00000622438 1686 ntBASIC18.66■□□□□ 0.58
CASD1Q96PB1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.66■□□□□ 0.58
CASD1Q96PB1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASD1Q96PB1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CASD1Q96PB1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.65■□□□□ 0.58
CASD1Q96PB1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.65■□□□□ 0.58
CASD1Q96PB1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.65■□□□□ 0.58
CASD1Q96PB1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.65■□□□□ 0.58
CASD1Q96PB1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.65■□□□□ 0.58
CASD1Q96PB1 FAM58CP-201ENST00000435741 640 ntBASIC18.65■□□□□ 0.58
CASD1Q96PB1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.65■□□□□ 0.58
CASD1Q96PB1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 RFPL4AP1-201ENST00000530883 850 ntBASIC18.65■□□□□ 0.58
CASD1Q96PB1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.65■□□□□ 0.58
CASD1Q96PB1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.65■□□□□ 0.58
CASD1Q96PB1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.65■□□□□ 0.58
CASD1Q96PB1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CASD1Q96PB1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.65■□□□□ 0.58
CASD1Q96PB1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASD1Q96PB1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CASD1Q96PB1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.64■□□□□ 0.58
CASD1Q96PB1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CASD1Q96PB1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.64■□□□□ 0.58
CASD1Q96PB1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASD1Q96PB1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASD1Q96PB1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASD1Q96PB1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASD1Q96PB1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASD1Q96PB1 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASD1Q96PB1 AC046185.3-201ENST00000623228 1824 ntBASIC18.64■□□□□ 0.57
CASD1Q96PB1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASD1Q96PB1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASD1Q96PB1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CASD1Q96PB1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms