Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 SART3-203ENST00000546611 1184 ntBASIC17.48■□□□□ 0.39
SCAMP4Q969E2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 AC004817.3-201ENST00000602957 2129 ntBASIC17.48■□□□□ 0.39
SCAMP4Q969E2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 LINC00304-203ENST00000565008 1864 ntBASIC17.48■□□□□ 0.39
SCAMP4Q969E2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SCAMP4Q969E2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.47■□□□□ 0.39
SCAMP4Q969E2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 AC005104.2-201ENST00000427818 678 ntBASIC17.47■□□□□ 0.39
SCAMP4Q969E2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 FAM197Y8-203ENST00000450145 560 ntBASIC17.47■□□□□ 0.39
SCAMP4Q969E2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 FZD10-202ENST00000539839 3282 ntBASIC17.47■□□□□ 0.39
SCAMP4Q969E2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 AL356309.3-201ENST00000624132 1934 ntBASIC17.47■□□□□ 0.39
SCAMP4Q969E2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCAMP4Q969E2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 MRPL3P1-201ENST00000400109 1033 ntBASIC17.46■□□□□ 0.39
SCAMP4Q969E2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 AC002558.1-201ENST00000488906 803 ntBASIC17.46■□□□□ 0.39
SCAMP4Q969E2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 IGHV3-52-201ENST00000519770 353 ntBASIC17.46■□□□□ 0.39
SCAMP4Q969E2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 NKAPP1-205ENST00000585790 367 ntBASIC17.46■□□□□ 0.39
SCAMP4Q969E2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCAMP4Q969E2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SCAMP4Q969E2 AC090340.1-201ENST00000620778 4980 ntBASIC17.46■□□□□ 0.38
SCAMP4Q969E2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP4Q969E2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP4Q969E2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP4Q969E2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP4Q969E2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP4Q969E2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCAMP4Q969E2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms