Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS1Q92902 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HPS1Q92902 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS1Q92902 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HPS1Q92902 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HPS1Q92902 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.17■□□□□ 0.18
HPS1Q92902 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS1Q92902 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.17■□□□□ 0.18
HPS1Q92902 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS1Q92902 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS1Q92902 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS1Q92902 CCR12P-201ENST00000446203 998 ntBASIC16.17■□□□□ 0.18
HPS1Q92902 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
HPS1Q92902 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.17■□□□□ 0.18
HPS1Q92902 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS1Q92902 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.17■□□□□ 0.18
HPS1Q92902 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS1Q92902 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HPS1Q92902 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS1Q92902 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS1Q92902 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS1Q92902 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS1Q92902 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS1Q92902 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS1Q92902 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS1Q92902 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS1Q92902 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HPS1Q92902 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS1Q92902 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HPS1Q92902 AC096733.2-201ENST00000609937 1394 ntBASIC16.16■□□□□ 0.18
HPS1Q92902 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS1Q92902 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS1Q92902 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
HPS1Q92902 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS1Q92902 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS1Q92902 SLC25A1P2-201ENST00000430693 912 ntBASIC16.16■□□□□ 0.18
HPS1Q92902 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS1Q92902 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS1Q92902 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 AC098799.1-201ENST00000504752 800 ntBASIC16.16■□□□□ 0.18
HPS1Q92902 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
HPS1Q92902 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.16■□□□□ 0.18
HPS1Q92902 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.16■□□□□ 0.18
HPS1Q92902 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HPS1Q92902 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.16■□□□□ 0.18
HPS1Q92902 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
HPS1Q92902 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.16■□□□□ 0.18
HPS1Q92902 AC116562.4-202ENST00000641738 218 ntBASIC16.16■□□□□ 0.18
HPS1Q92902 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HPS1Q92902 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
HPS1Q92902 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HPS1Q92902 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS1Q92902 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.16■□□□□ 0.18
HPS1Q92902 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS1Q92902 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HPS1Q92902 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
HPS1Q92902 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS1Q92902 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 KRT8P41-201ENST00000533985 1514 ntBASIC16.15■□□□□ 0.18
HPS1Q92902 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HPS1Q92902 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HPS1Q92902 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS1Q92902 HMGA1P5-201ENST00000412453 271 ntBASIC16.15■□□□□ 0.18
HPS1Q92902 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.15■□□□□ 0.18
HPS1Q92902 SDHAP1-207ENST00000440850 2000 ntBASIC16.15■□□□□ 0.18
HPS1Q92902 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 AC091390.4-202ENST00000476426 537 ntBASIC16.15■□□□□ 0.18
HPS1Q92902 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS1Q92902 DUX4L26-201ENST00000489078 1255 ntBASIC16.15■□□□□ 0.18
HPS1Q92902 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS1Q92902 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS1Q92902 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS1Q92902 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.15■□□□□ 0.18
HPS1Q92902 LINC01238-205ENST00000567549 1107 ntBASIC16.15■□□□□ 0.18
HPS1Q92902 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.15■□□□□ 0.18
HPS1Q92902 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS1Q92902 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms