Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 CA15P1-201ENST00000481698 905 ntBASIC15.08■□□□□ 0
SMIM4Q8WVI0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.08■□□□□ 0
SMIM4Q8WVI0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SMIM4Q8WVI0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.08■□□□□ 0
SMIM4Q8WVI0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 LINC00554-201ENST00000564841 3011 ntBASIC15.07■□□□□ 0
SMIM4Q8WVI0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 AC104390.1-201ENST00000555663 520 ntBASIC15.07■□□□□ 0
SMIM4Q8WVI0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 AC233263.1-201ENST00000578059 224 ntBASIC15.07■□□□□ 0
SMIM4Q8WVI0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 CR392000.1-201ENST00000624770 1228 ntBASIC15.07■□□□□ 0
SMIM4Q8WVI0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.07■□□□□ 0
SMIM4Q8WVI0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.07■□□□□ 0
SMIM4Q8WVI0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 AL353807.1-201ENST00000427475 662 ntBASIC15.06■□□□□ 0
SMIM4Q8WVI0 AC133681.1-201ENST00000465482 601 ntBASIC15.06■□□□□ 0
SMIM4Q8WVI0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 AC008687.5-201ENST00000593746 558 ntBASIC15.06■□□□□ 0
SMIM4Q8WVI0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 AC124016.1-201ENST00000609552 612 ntBASIC15.06■□□□□ 0
SMIM4Q8WVI0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms