Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP1Q8TDR0 AC141586.5-201ENST00000624546 2050 ntBASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 AL138688.1-201ENST00000624851 1594 ntBASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 PP12613-201ENST00000424958 2230 ntBASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 SPDYE13P-201ENST00000445314 798 ntBASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 KRT18P21-201ENST00000515767 1272 ntBASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 AL023806.1-201ENST00000603994 1649 ntBASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAF3IP1Q8TDR0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 REXO1L11P-201ENST00000620964 1927 ntBASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 GUSBP12-201ENST00000513727 720 ntBASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF3IP1Q8TDR0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms