Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 RNF216P1-203ENST00000404404 2427 ntBASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MIR5787-201ENST00000611784 55 ntBASIC13.19□□□□□ -0.3
NUP35Q8NFH5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 AC105917.1-201ENST00000506637 2539 ntBASIC13.18□□□□□ -0.3
NUP35Q8NFH5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 AC009949.1-201ENST00000623048 1830 ntBASIC13.18□□□□□ -0.3
NUP35Q8NFH5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.18□□□□□ -0.3
NUP35Q8NFH5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 AL662844.4-201ENST00000606367 2838 ntBASIC13.18□□□□□ -0.3
NUP35Q8NFH5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms