Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NUP35Q8NFH5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 RNF216P1-203ENST00000404404 2427 ntBASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MIR5787-201ENST00000611784 55 ntBASIC13.19□□□□□ -0.3
NUP35Q8NFH5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NUP35Q8NFH5 AC105917.1-201ENST00000506637 2539 ntBASIC13.18□□□□□ -0.3
NUP35Q8NFH5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 AC009949.1-201ENST00000623048 1830 ntBASIC13.18□□□□□ -0.3
NUP35Q8NFH5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.18□□□□□ -0.3
NUP35Q8NFH5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 AL662844.4-201ENST00000606367 2838 ntBASIC13.18□□□□□ -0.3
NUP35Q8NFH5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP35Q8NFH5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP35Q8NFH5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms