Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 FLJ16779-201ENST00000612722 7638 ntBASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 CYP2D8P-201ENST00000433633 1490 ntBASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 INGX-201ENST00000359239 846 ntBASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 AC009947.2-201ENST00000444014 672 ntBASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
DNAAF1Q8NEP3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 MIR3917-201ENST00000580971 93 ntBASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 FAM87A-204ENST00000613235 858 ntBASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DNAAF1Q8NEP3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
DNAAF1Q8NEP3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 AC008894.3-201ENST00000624324 3103 ntBASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms