Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 KRT8P10-201ENST00000450021 1447 ntBASIC21.76■■□□□ 1.07
SMC5Q8IY18 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.76■■□□□ 1.07
SMC5Q8IY18 LINC02012-201ENST00000608206 1725 ntBASIC21.76■■□□□ 1.07
SMC5Q8IY18 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.76■■□□□ 1.07
SMC5Q8IY18 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 AL353593.2-201ENST00000602529 1483 ntBASIC21.76■■□□□ 1.07
SMC5Q8IY18 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SMC5Q8IY18 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMC5Q8IY18 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMC5Q8IY18 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.75■■□□□ 1.07
SMC5Q8IY18 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.75■■□□□ 1.07
SMC5Q8IY18 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMC5Q8IY18 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMC5Q8IY18 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMC5Q8IY18 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMC5Q8IY18 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMC5Q8IY18 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMC5Q8IY18 FAM220CP-201ENST00000395253 831 ntBASIC21.75■■□□□ 1.07
SMC5Q8IY18 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMC5Q8IY18 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.75■■□□□ 1.07
SMC5Q8IY18 CHCHD2P8-201ENST00000429873 447 ntBASIC21.75■■□□□ 1.07
SMC5Q8IY18 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.75■■□□□ 1.07
SMC5Q8IY18 AC103564.2-201ENST00000432853 1299 ntBASIC21.75■■□□□ 1.07
SMC5Q8IY18 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.75■■□□□ 1.07
SMC5Q8IY18 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.75■■□□□ 1.07
SMC5Q8IY18 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.75■■□□□ 1.07
SMC5Q8IY18 STK25P1-201ENST00000585406 838 ntBASIC21.75■■□□□ 1.07
SMC5Q8IY18 NTF6B-201ENST00000591913 560 ntBASIC21.75■■□□□ 1.07
SMC5Q8IY18 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.75■■□□□ 1.07
SMC5Q8IY18 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMC5Q8IY18 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMC5Q8IY18 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
SMC5Q8IY18 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SMC5Q8IY18 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMC5Q8IY18 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMC5Q8IY18 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMC5Q8IY18 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.74■■□□□ 1.07
SMC5Q8IY18 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMC5Q8IY18 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMC5Q8IY18 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC5Q8IY18 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC5Q8IY18 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.74■■□□□ 1.07
SMC5Q8IY18 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMC5Q8IY18 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC5Q8IY18 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC5Q8IY18 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SMC5Q8IY18 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SMC5Q8IY18 IGHV3-52-201ENST00000519770 353 ntBASIC21.74■■□□□ 1.07
SMC5Q8IY18 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.74■■□□□ 1.07
SMC5Q8IY18 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.74■■□□□ 1.07
SMC5Q8IY18 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC5Q8IY18 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SMC5Q8IY18 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.74■■□□□ 1.07
SMC5Q8IY18 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC5Q8IY18 AC093525.9-201ENST00000624961 1746 ntBASIC21.74■■□□□ 1.07
SMC5Q8IY18 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SMC5Q8IY18 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC5Q8IY18 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.74■■□□□ 1.07
SMC5Q8IY18 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC5Q8IY18 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 AL121672.3-201ENST00000608644 468 ntBASIC21.73■■□□□ 1.07
SMC5Q8IY18 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.73■■□□□ 1.07
SMC5Q8IY18 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC5Q8IY18 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.73■■□□□ 1.07
SMC5Q8IY18 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms