Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC091812.2-201ENST00000619081 385 ntBASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPAS4Q8IUM7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPAS4Q8IUM7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
NPAS4Q8IUM7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 AL590787.1-201ENST00000568856 1315 ntBASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.76■□□□□ 0.59
NPAS4Q8IUM7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NPAS4Q8IUM7 KRT18P55-202ENST00000578578 1546 ntBASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS4Q8IUM7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms