Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.34■□□□□ 0.53
RFX6Q8HWS3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 KRT18P21-201ENST00000515767 1272 ntBASIC18.34■□□□□ 0.53
RFX6Q8HWS3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RFX6Q8HWS3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.33■□□□□ 0.53
RFX6Q8HWS3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFX6Q8HWS3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFX6Q8HWS3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFX6Q8HWS3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFX6Q8HWS3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.33■□□□□ 0.53
RFX6Q8HWS3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFX6Q8HWS3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFX6Q8HWS3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.33■□□□□ 0.53
RFX6Q8HWS3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 GUSBP12-201ENST00000513727 720 ntBASIC18.33■□□□□ 0.52
RFX6Q8HWS3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX6Q8HWS3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 TSPY22P-201ENST00000427496 604 ntBASIC18.32■□□□□ 0.52
RFX6Q8HWS3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.32■□□□□ 0.52
RFX6Q8HWS3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.32■□□□□ 0.52
RFX6Q8HWS3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RFX6Q8HWS3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX6Q8HWS3 AC080080.1-201ENST00000625121 2420 ntBASIC18.31■□□□□ 0.52
RFX6Q8HWS3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms