Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC30AQ86WT1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC30AQ86WT1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TTC30AQ86WT1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TTC30AQ86WT1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC30AQ86WT1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
TTC30AQ86WT1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TTC30AQ86WT1 GNAS-203ENST00000306120 1878 ntBASIC18.69■□□□□ 0.58
TTC30AQ86WT1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.69■□□□□ 0.58
TTC30AQ86WT1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.69■□□□□ 0.58
TTC30AQ86WT1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TTC30AQ86WT1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TTC30AQ86WT1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.69■□□□□ 0.58
TTC30AQ86WT1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 PKD1P1-201ENST00000458669 6805 ntBASIC18.68■□□□□ 0.58
TTC30AQ86WT1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 AL591684.3-201ENST00000605187 298 ntBASIC18.68■□□□□ 0.58
TTC30AQ86WT1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC30AQ86WT1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 AC005104.2-201ENST00000427818 678 ntBASIC18.67■□□□□ 0.58
TTC30AQ86WT1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 AL049757.1-201ENST00000616842 1596 ntBASIC18.67■□□□□ 0.58
TTC30AQ86WT1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TTC30AQ86WT1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 AL022342.1-201ENST00000400363 863 ntBASIC18.66■□□□□ 0.58
TTC30AQ86WT1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 AL160237.2-201ENST00000556165 472 ntBASIC18.66■□□□□ 0.58
TTC30AQ86WT1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC30AQ86WT1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC30AQ86WT1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC30AQ86WT1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms