Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 CYP2T1P-202ENST00000641596 2535 ntBASIC17.76■□□□□ 0.43
PACS2Q86VP3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 C8orf49-201ENST00000525043 1968 ntBASIC17.75■□□□□ 0.43
PACS2Q86VP3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 NUDT16P1-203ENST00000513809 620 ntBASIC17.75■□□□□ 0.43
PACS2Q86VP3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.75■□□□□ 0.43
PACS2Q86VP3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS2Q86VP3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.74■□□□□ 0.43
PACS2Q86VP3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PACS2Q86VP3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PACS2Q86VP3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.74■□□□□ 0.43
PACS2Q86VP3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PACS2Q86VP3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.74■□□□□ 0.43
PACS2Q86VP3 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.74■□□□□ 0.43
PACS2Q86VP3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.74■□□□□ 0.43
PACS2Q86VP3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.74■□□□□ 0.43
PACS2Q86VP3 AP003071.4-201ENST00000562276 1284 ntBASIC17.74■□□□□ 0.43
PACS2Q86VP3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.74■□□□□ 0.43
PACS2Q86VP3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.74■□□□□ 0.43
PACS2Q86VP3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.74■□□□□ 0.43
PACS2Q86VP3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS2Q86VP3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms