Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AP002383.4-201ENST00000442518 975 ntBASIC17.59■□□□□ 0.41
LDB1Q86U70 TSSC2-201ENST00000450217 709 ntBASIC17.59■□□□□ 0.41
LDB1Q86U70 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.59■□□□□ 0.41
LDB1Q86U70 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
LDB1Q86U70 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.59■□□□□ 0.41
LDB1Q86U70 AL353801.3-201ENST00000609898 542 ntBASIC17.59■□□□□ 0.41
LDB1Q86U70 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LDB1Q86U70 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LDB1Q86U70 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.58■□□□□ 0.41
LDB1Q86U70 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LDB1Q86U70 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LDB1Q86U70 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
LDB1Q86U70 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
LDB1Q86U70 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
LDB1Q86U70 AL138688.1-201ENST00000624851 1594 ntBASIC17.58■□□□□ 0.41
LDB1Q86U70 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LDB1Q86U70 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LDB1Q86U70 AC125634.1-201ENST00000438758 1403 ntBASIC17.58■□□□□ 0.41
LDB1Q86U70 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LDB1Q86U70 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LDB1Q86U70 KRT18P1-202ENST00000452408 1331 ntBASIC17.58■□□□□ 0.4
LDB1Q86U70 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB1Q86U70 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB1Q86U70 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB1Q86U70 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB1Q86U70 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
LDB1Q86U70 AC007967.3-201ENST00000434308 558 ntBASIC17.58■□□□□ 0.4
LDB1Q86U70 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.58■□□□□ 0.4
LDB1Q86U70 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.58■□□□□ 0.4
LDB1Q86U70 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.58■□□□□ 0.4
LDB1Q86U70 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.58■□□□□ 0.4
LDB1Q86U70 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LDB1Q86U70 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LDB1Q86U70 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.58■□□□□ 0.4
LDB1Q86U70 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB1Q86U70 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.58■□□□□ 0.4
LDB1Q86U70 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB1Q86U70 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.58■□□□□ 0.4
LDB1Q86U70 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB1Q86U70 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.58■□□□□ 0.4
LDB1Q86U70 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB1Q86U70 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.58■□□□□ 0.4
LDB1Q86U70 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LDB1Q86U70 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.58■□□□□ 0.4
LDB1Q86U70 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.57■□□□□ 0.4
LDB1Q86U70 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB1Q86U70 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB1Q86U70 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.57■□□□□ 0.4
LDB1Q86U70 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB1Q86U70 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LDB1Q86U70 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
LDB1Q86U70 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDB1Q86U70 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDB1Q86U70 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.57■□□□□ 0.4
LDB1Q86U70 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB1Q86U70 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDB1Q86U70 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.57■□□□□ 0.4
LDB1Q86U70 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.57■□□□□ 0.4
LDB1Q86U70 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.57■□□□□ 0.4
LDB1Q86U70 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.57■□□□□ 0.4
LDB1Q86U70 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB1Q86U70 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.57■□□□□ 0.4
LDB1Q86U70 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB1Q86U70 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB1Q86U70 LYSMD4-203ENST00000378904 2122 ntBASIC17.57■□□□□ 0.4
LDB1Q86U70 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB1Q86U70 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB1Q86U70 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB1Q86U70 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LDB1Q86U70 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDB1Q86U70 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LDB1Q86U70 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB1Q86U70 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB1Q86U70 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDB1Q86U70 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB1Q86U70 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.56■□□□□ 0.4
LDB1Q86U70 AC097374.2-201ENST00000618617 1306 ntBASIC17.56■□□□□ 0.4
LDB1Q86U70 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB1Q86U70 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.56■□□□□ 0.4
LDB1Q86U70 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB1Q86U70 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB1Q86U70 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.56■□□□□ 0.4
LDB1Q86U70 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
LDB1Q86U70 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.56■□□□□ 0.4
LDB1Q86U70 AP002414.4-201ENST00000589764 1148 ntBASIC17.56■□□□□ 0.4
LDB1Q86U70 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LDB1Q86U70 AL138831.2-201ENST00000606564 490 ntBASIC17.56■□□□□ 0.4
LDB1Q86U70 AP000550.4-202ENST00000639755 178 ntBASIC17.56■□□□□ 0.4
LDB1Q86U70 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms