Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 MIR1199-201ENST00000621445 119 ntBASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 TERC-201ENST00000602385 541 ntBASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 AC140113.2-201ENST00000604370 208 ntBASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
UBE3BQ7Z3V4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
UBE3BQ7Z3V4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
UBE3BQ7Z3V4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
UBE3BQ7Z3V4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
UBE3BQ7Z3V4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.89■■□□□ 1.1
UBE3BQ7Z3V4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.89■■□□□ 1.1
UBE3BQ7Z3V4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UBE3BQ7Z3V4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 AC097637.2-201ENST00000624096 1997 ntBASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 MYCLP1-201ENST00000372451 1075 ntBASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 MED15P5-201ENST00000423150 992 ntBASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 AC027601.4-201ENST00000611259 610 ntBASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 AC005593.1-201ENST00000624894 515 ntBASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBE3BQ7Z3V4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 AL390961.4-201ENST00000623958 2535 ntBASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 AC006116.8-202ENST00000587620 1550 ntBASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms