Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.99■■□□□ 1.11
RC3H1Q5TC82 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.99■■□□□ 1.11
RC3H1Q5TC82 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RC3H1Q5TC82 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RC3H1Q5TC82 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RC3H1Q5TC82 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.99■■□□□ 1.11
RC3H1Q5TC82 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
RC3H1Q5TC82 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 PMS2P4-201ENST00000412466 1052 ntBASIC21.98■■□□□ 1.11
RC3H1Q5TC82 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 AC005237.2-201ENST00000434368 219 ntBASIC21.98■■□□□ 1.11
RC3H1Q5TC82 SPDYE11-202ENST00000450699 704 ntBASIC21.98■■□□□ 1.11
RC3H1Q5TC82 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 SPDYE9P-201ENST00000570642 692 ntBASIC21.98■■□□□ 1.11
RC3H1Q5TC82 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 SPDYE10P-202ENST00000612005 668 ntBASIC21.98■■□□□ 1.11
RC3H1Q5TC82 SPDYE8P-202ENST00000612377 668 ntBASIC21.98■■□□□ 1.11
RC3H1Q5TC82 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.98■■□□□ 1.11
RC3H1Q5TC82 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 AC055876.3-201ENST00000431496 288 ntBASIC21.97■■□□□ 1.11
RC3H1Q5TC82 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 AC243562.1-201ENST00000560672 389 ntBASIC21.97■■□□□ 1.11
RC3H1Q5TC82 AC138649.4-201ENST00000612222 287 ntBASIC21.97■■□□□ 1.11
RC3H1Q5TC82 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 AP001059.3-201ENST00000619053 235 ntBASIC21.97■■□□□ 1.11
RC3H1Q5TC82 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RC3H1Q5TC82 AC135776.1-201ENST00000319817 2481 ntBASIC21.97■■□□□ 1.11
RC3H1Q5TC82 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 AL592309.1-201ENST00000443127 649 ntBASIC21.96■■□□□ 1.11
RC3H1Q5TC82 CNN2P2-201ENST00000443536 909 ntBASIC21.96■■□□□ 1.11
RC3H1Q5TC82 CNN2P3-201ENST00000450201 906 ntBASIC21.96■■□□□ 1.11
RC3H1Q5TC82 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 AC079140.1-201ENST00000508039 487 ntBASIC21.96■■□□□ 1.11
RC3H1Q5TC82 AC093214.1-201ENST00000511688 1107 ntBASIC21.96■■□□□ 1.11
RC3H1Q5TC82 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 AL136317.3-201ENST00000618497 906 ntBASIC21.96■■□□□ 1.11
RC3H1Q5TC82 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.96■■□□□ 1.11
RC3H1Q5TC82 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 AL020996.1-203ENST00000536896 2307 ntBASIC21.95■■□□□ 1.1
RC3H1Q5TC82 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms