Protein–RNA interactions for Protein: Q15003

NCAPH, Condensin complex subunit 2, humanhuman

Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPHQ15003 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCAPHQ15003 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCAPHQ15003 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.44■□□□□ 0.7
NCAPHQ15003 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCAPHQ15003 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.44■□□□□ 0.7
NCAPHQ15003 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.44■□□□□ 0.7
NCAPHQ15003 AC068472.1-201ENST00000474589 881 ntBASIC19.44■□□□□ 0.7
NCAPHQ15003 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NCAPHQ15003 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NCAPHQ15003 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCAPHQ15003 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NCAPHQ15003 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCAPHQ15003 HTR7P1-202ENST00000624664 4411 ntBASIC19.44■□□□□ 0.7
NCAPHQ15003 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCAPHQ15003 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NCAPHQ15003 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.44■□□□□ 0.7
NCAPHQ15003 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCAPHQ15003 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCAPHQ15003 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.44■□□□□ 0.7
NCAPHQ15003 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.44■□□□□ 0.7
NCAPHQ15003 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCAPHQ15003 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NCAPHQ15003 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCAPHQ15003 LINC01568-207ENST00000641790 1380 ntBASIC19.44■□□□□ 0.7
NCAPHQ15003 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCAPHQ15003 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.43■□□□□ 0.7
NCAPHQ15003 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
NCAPHQ15003 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
NCAPHQ15003 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NCAPHQ15003 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NCAPHQ15003 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.43■□□□□ 0.7
NCAPHQ15003 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.43■□□□□ 0.7
NCAPHQ15003 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.43■□□□□ 0.7
NCAPHQ15003 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NCAPHQ15003 KRT18P48-201ENST00000434763 852 ntBASIC19.43■□□□□ 0.7
NCAPHQ15003 MTCL1P1-201ENST00000446207 792 ntBASIC19.43■□□□□ 0.7
NCAPHQ15003 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.43■□□□□ 0.7
NCAPHQ15003 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NCAPHQ15003 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.43■□□□□ 0.7
NCAPHQ15003 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.43■□□□□ 0.7
NCAPHQ15003 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.43■□□□□ 0.7
NCAPHQ15003 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
NCAPHQ15003 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NCAPHQ15003 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.43■□□□□ 0.7
NCAPHQ15003 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCAPHQ15003 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCAPHQ15003 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCAPHQ15003 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.42■□□□□ 0.7
NCAPHQ15003 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.42■□□□□ 0.7
NCAPHQ15003 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCAPHQ15003 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCAPHQ15003 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCAPHQ15003 IGHGP-201ENST00000390555 1178 ntBASIC19.42■□□□□ 0.7
NCAPHQ15003 AL441883.1-201ENST00000566170 1045 ntBASIC19.42■□□□□ 0.7
NCAPHQ15003 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.42■□□□□ 0.7
NCAPHQ15003 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.42■□□□□ 0.7
NCAPHQ15003 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCAPHQ15003 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCAPHQ15003 AC078925.2-201ENST00000624013 1973 ntBASIC19.42■□□□□ 0.7
NCAPHQ15003 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCAPHQ15003 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCAPHQ15003 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCAPHQ15003 AC093525.9-201ENST00000624961 1746 ntBASIC19.42■□□□□ 0.7
NCAPHQ15003 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NCAPHQ15003 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
NCAPHQ15003 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NCAPHQ15003 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NCAPHQ15003 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCAPHQ15003 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NCAPHQ15003 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.41■□□□□ 0.7
NCAPHQ15003 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NCAPHQ15003 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.41■□□□□ 0.7
NCAPHQ15003 AC010460.3-201ENST00000511359 1579 ntBASIC19.41■□□□□ 0.7
NCAPHQ15003 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCAPHQ15003 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCAPHQ15003 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
NCAPHQ15003 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCAPHQ15003 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NCAPHQ15003 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.41■□□□□ 0.7
NCAPHQ15003 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NCAPHQ15003 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCAPHQ15003 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms