Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SSBP1Q04837 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 AC092068.3-201ENST00000587894 2016 ntBASIC14.92□□□□□ -0.02
SSBP1Q04837 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SSBP1Q04837 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.92□□□□□ -0.02
SSBP1Q04837 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.92□□□□□ -0.02
SSBP1Q04837 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
SSBP1Q04837 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.92□□□□□ -0.02
SSBP1Q04837 AC124947.2-201ENST00000547118 1133 ntBASIC14.92□□□□□ -0.02
SSBP1Q04837 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.92□□□□□ -0.02
SSBP1Q04837 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SSBP1Q04837 RN7SL471P-201ENST00000580476 299 ntBASIC14.92□□□□□ -0.02
SSBP1Q04837 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.92□□□□□ -0.02
SSBP1Q04837 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.92□□□□□ -0.02
SSBP1Q04837 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SSBP1Q04837 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SSBP1Q04837 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.92□□□□□ -0.02
SSBP1Q04837 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
SSBP1Q04837 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
SSBP1Q04837 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SSBP1Q04837 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.92□□□□□ -0.02
SSBP1Q04837 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 KRT8P9-201ENST00000558927 1449 ntBASIC14.92□□□□□ -0.02
SSBP1Q04837 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.91□□□□□ -0.02
SSBP1Q04837 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SSBP1Q04837 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.91□□□□□ -0.02
SSBP1Q04837 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.91□□□□□ -0.02
SSBP1Q04837 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
SSBP1Q04837 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.91□□□□□ -0.02
SSBP1Q04837 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 KRT18P65-201ENST00000439811 1286 ntBASIC14.91□□□□□ -0.02
SSBP1Q04837 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.91□□□□□ -0.02
SSBP1Q04837 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.91□□□□□ -0.02
SSBP1Q04837 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.91□□□□□ -0.02
SSBP1Q04837 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.91□□□□□ -0.02
SSBP1Q04837 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.91□□□□□ -0.02
SSBP1Q04837 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
SSBP1Q04837 AL139327.4-201ENST00000612362 153 ntBASIC14.91□□□□□ -0.02
SSBP1Q04837 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.91□□□□□ -0.02
SSBP1Q04837 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SSBP1Q04837 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.91□□□□□ -0.02
SSBP1Q04837 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SSBP1Q04837 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SSBP1Q04837 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP1Q04837 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP1Q04837 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SSBP1Q04837 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.9□□□□□ -0.02
SSBP1Q04837 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SSBP1Q04837 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SSBP1Q04837 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP1Q04837 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SSBP1Q04837 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP1Q04837 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms