Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.93■□□□□ 0.78
CCNA1P78396 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 AC027612.4-201ENST00000605371 583 ntBASIC19.93■□□□□ 0.78
CCNA1P78396 AC091812.2-201ENST00000619081 385 ntBASIC19.93■□□□□ 0.78
CCNA1P78396 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.93■□□□□ 0.78
CCNA1P78396 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.93■□□□□ 0.78
CCNA1P78396 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.93■□□□□ 0.78
CCNA1P78396 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCNA1P78396 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.92■□□□□ 0.78
CCNA1P78396 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.92■□□□□ 0.78
CCNA1P78396 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCNA1P78396 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 TSEN15P1-201ENST00000423257 515 ntBASIC19.92■□□□□ 0.78
CCNA1P78396 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.92■□□□□ 0.78
CCNA1P78396 AC106028.4-201ENST00000614509 607 ntBASIC19.92■□□□□ 0.78
CCNA1P78396 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCNA1P78396 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
CCNA1P78396 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNA1P78396 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCNA1P78396 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCNA1P78396 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCNA1P78396 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.91■□□□□ 0.78
CCNA1P78396 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCNA1P78396 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CCNA1P78396 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCNA1P78396 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CCNA1P78396 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.91■□□□□ 0.78
CCNA1P78396 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCNA1P78396 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.91■□□□□ 0.78
CCNA1P78396 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.91■□□□□ 0.78
CCNA1P78396 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.91■□□□□ 0.78
CCNA1P78396 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.91■□□□□ 0.78
CCNA1P78396 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.91■□□□□ 0.78
CCNA1P78396 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.91■□□□□ 0.78
CCNA1P78396 AC004835.2-201ENST00000603762 682 ntBASIC19.91■□□□□ 0.78
CCNA1P78396 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCNA1P78396 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCNA1P78396 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCNA1P78396 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCNA1P78396 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCNA1P78396 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNA1P78396 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNA1P78396 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.9■□□□□ 0.78
CCNA1P78396 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCNA1P78396 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
CCNA1P78396 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCNA1P78396 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCNA1P78396 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNA1P78396 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.9■□□□□ 0.78
CCNA1P78396 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCNA1P78396 MIR770-201ENST00000390219 98 ntBASIC19.9■□□□□ 0.78
CCNA1P78396 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.9■□□□□ 0.78
CCNA1P78396 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCNA1P78396 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCNA1P78396 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.9■□□□□ 0.78
CCNA1P78396 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.9■□□□□ 0.78
CCNA1P78396 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.9■□□□□ 0.78
CCNA1P78396 AC011467.4-201ENST00000594891 528 ntBASIC19.9■□□□□ 0.78
CCNA1P78396 AC092364.2-202ENST00000597012 1073 ntBASIC19.9■□□□□ 0.78
CCNA1P78396 AC068137.2-201ENST00000605408 478 ntBASIC19.9■□□□□ 0.78
CCNA1P78396 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.9■□□□□ 0.78
CCNA1P78396 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.9■□□□□ 0.78
CCNA1P78396 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNA1P78396 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.9■□□□□ 0.78
CCNA1P78396 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNA1P78396 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCNA1P78396 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNA1P78396 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNA1P78396 AC135776.1-201ENST00000319817 2481 ntBASIC19.9■□□□□ 0.78
CCNA1P78396 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNA1P78396 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.78
CCNA1P78396 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
CCNA1P78396 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCNA1P78396 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms