Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RPL39P62891 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.48□□□□□ -0.41
RPL39P62891 FAM197Y1-201ENST00000421178 764 ntBASIC12.48□□□□□ -0.41
RPL39P62891 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC12.48□□□□□ -0.41
RPL39P62891 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.48□□□□□ -0.41
RPL39P62891 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
RPL39P62891 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.48□□□□□ -0.41
RPL39P62891 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.48□□□□□ -0.41
RPL39P62891 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
RPL39P62891 AC073648.6-201ENST00000641589 218 ntBASIC12.48□□□□□ -0.41
RPL39P62891 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RPL39P62891 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.48□□□□□ -0.41
RPL39P62891 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RPL39P62891 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.48□□□□□ -0.41
RPL39P62891 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
RPL39P62891 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RPL39P62891 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RPL39P62891 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.48□□□□□ -0.41
RPL39P62891 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.48□□□□□ -0.41
RPL39P62891 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPL39P62891 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RPL39P62891 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.47□□□□□ -0.41
RPL39P62891 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RPL39P62891 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.47□□□□□ -0.41
RPL39P62891 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RPL39P62891 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RPL39P62891 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RPL39P62891 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RPL39P62891 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.47□□□□□ -0.41
RPL39P62891 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.47□□□□□ -0.41
RPL39P62891 AC097488.1-201ENST00000507834 756 ntBASIC12.47□□□□□ -0.41
RPL39P62891 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.47□□□□□ -0.41
RPL39P62891 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.47□□□□□ -0.41
RPL39P62891 C1QBPP2-201ENST00000528754 825 ntBASIC12.47□□□□□ -0.41
RPL39P62891 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.47□□□□□ -0.41
RPL39P62891 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.47□□□□□ -0.41
RPL39P62891 AC116407.2-201ENST00000613639 860 ntBASIC12.47□□□□□ -0.41
RPL39P62891 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.47□□□□□ -0.41
RPL39P62891 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.47□□□□□ -0.41
RPL39P62891 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.47□□□□□ -0.41
RPL39P62891 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.47□□□□□ -0.41
RPL39P62891 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
RPL39P62891 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.47□□□□□ -0.41
RPL39P62891 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.47□□□□□ -0.41
RPL39P62891 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RPL39P62891 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
RPL39P62891 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.46□□□□□ -0.41
RPL39P62891 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 AC011270.2-201ENST00000624293 2550 ntBASIC12.46□□□□□ -0.41
RPL39P62891 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
RPL39P62891 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.46□□□□□ -0.41
RPL39P62891 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
RPL39P62891 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.46□□□□□ -0.41
RPL39P62891 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RPL39P62891 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms