Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH4P55283 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH4P55283 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH4P55283 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH4P55283 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH4P55283 AC133963.1-201ENST00000504166 1679 ntBASIC17.99■□□□□ 0.47
CDH4P55283 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH4P55283 GNAS-203ENST00000306120 1878 ntBASIC17.99■□□□□ 0.47
CDH4P55283 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH4P55283 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
CDH4P55283 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CDH4P55283 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH4P55283 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH4P55283 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CDH4P55283 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH4P55283 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CDH4P55283 AC134043.2-201ENST00000624206 2238 ntBASIC17.98■□□□□ 0.47
CDH4P55283 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH4P55283 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH4P55283 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH4P55283 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH4P55283 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH4P55283 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH4P55283 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 KRT18P67-201ENST00000432816 1264 ntBASIC17.98■□□□□ 0.47
CDH4P55283 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.98■□□□□ 0.47
CDH4P55283 PRYP5-201ENST00000451909 266 ntBASIC17.98■□□□□ 0.47
CDH4P55283 AC009078.2-202ENST00000463353 338 ntBASIC17.98■□□□□ 0.47
CDH4P55283 AF186996.4-201ENST00000467186 377 ntBASIC17.98■□□□□ 0.47
CDH4P55283 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH4P55283 BX005266.1-201ENST00000473402 457 ntBASIC17.98■□□□□ 0.47
CDH4P55283 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.98■□□□□ 0.47
CDH4P55283 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH4P55283 AC021087.4-201ENST00000563761 564 ntBASIC17.98■□□□□ 0.47
CDH4P55283 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH4P55283 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH4P55283 AL022326.1-202ENST00000641533 845 ntBASIC17.98■□□□□ 0.47
CDH4P55283 AC009336.1-201ENST00000608941 1553 ntBASIC17.98■□□□□ 0.47
CDH4P55283 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CDH4P55283 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
CDH4P55283 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CDH4P55283 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH4P55283 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH4P55283 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH4P55283 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH4P55283 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH4P55283 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH4P55283 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDH4P55283 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CDH4P55283 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
CDH4P55283 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH4P55283 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 FDX1P1-201ENST00000449115 551 ntBASIC17.97■□□□□ 0.47
CDH4P55283 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH4P55283 SIGLEC30P-201ENST00000455569 941 ntBASIC17.97■□□□□ 0.47
CDH4P55283 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH4P55283 RNPS1P1-201ENST00000507437 918 ntBASIC17.97■□□□□ 0.47
CDH4P55283 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH4P55283 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH4P55283 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH4P55283 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH4P55283 AL139327.4-201ENST00000612362 153 ntBASIC17.97■□□□□ 0.47
CDH4P55283 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH4P55283 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH4P55283 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH4P55283 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
CDH4P55283 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH4P55283 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CDH4P55283 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH4P55283 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH4P55283 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms