Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.91□□□□□ -0.34
APOC4P55056 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 HLA-J-201ENST00000462773 1622 ntBASIC12.91□□□□□ -0.34
APOC4P55056 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
APOC4P55056 AC079776.2-201ENST00000641154 1609 ntBASIC12.91□□□□□ -0.34
APOC4P55056 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
APOC4P55056 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC4P55056 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
APOC4P55056 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 PMPCAP1-201ENST00000508114 1576 ntBASIC12.9□□□□□ -0.34
APOC4P55056 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
APOC4P55056 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 AL022342.1-201ENST00000400363 863 ntBASIC12.9□□□□□ -0.34
APOC4P55056 AC018712.1-201ENST00000455767 687 ntBASIC12.9□□□□□ -0.34
APOC4P55056 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.9□□□□□ -0.34
APOC4P55056 SART3-203ENST00000546611 1184 ntBASIC12.9□□□□□ -0.34
APOC4P55056 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.9□□□□□ -0.34
APOC4P55056 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 NKAPP1-205ENST00000585790 367 ntBASIC12.9□□□□□ -0.34
APOC4P55056 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.9□□□□□ -0.34
APOC4P55056 MTDHP4-201ENST00000600287 670 ntBASIC12.9□□□□□ -0.34
APOC4P55056 BX640515.1-201ENST00000617215 977 ntBASIC12.9□□□□□ -0.34
APOC4P55056 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC4P55056 AC009949.1-201ENST00000623048 1830 ntBASIC12.9□□□□□ -0.34
APOC4P55056 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC4P55056 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.9□□□□□ -0.35
APOC4P55056 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC12.9□□□□□ -0.35
APOC4P55056 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
APOC4P55056 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC4P55056 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 AL020996.1-203ENST00000536896 2307 ntBASIC12.89□□□□□ -0.35
APOC4P55056 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
APOC4P55056 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC4P55056 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC4P55056 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC4P55056 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
APOC4P55056 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 LAGE3P1-201ENST00000425356 484 ntBASIC12.89□□□□□ -0.35
APOC4P55056 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.89□□□□□ -0.35
APOC4P55056 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
APOC4P55056 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC4P55056 AC002558.1-201ENST00000488906 803 ntBASIC12.89□□□□□ -0.35
APOC4P55056 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.89□□□□□ -0.35
APOC4P55056 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.89□□□□□ -0.35
APOC4P55056 AC021087.4-201ENST00000563761 564 ntBASIC12.89□□□□□ -0.35
APOC4P55056 AC139887.3-201ENST00000568585 713 ntBASIC12.89□□□□□ -0.35
APOC4P55056 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.89□□□□□ -0.35
APOC4P55056 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
APOC4P55056 AC138028.4-201ENST00000564984 1845 ntBASIC12.89□□□□□ -0.35
APOC4P55056 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 ABALON-201ENST00000629058 1903 ntBASIC12.89□□□□□ -0.35
APOC4P55056 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC4P55056 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC4P55056 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC12.89□□□□□ -0.35
APOC4P55056 SIRPAP1-201ENST00000448467 1770 ntBASIC12.89□□□□□ -0.35
APOC4P55056 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
APOC4P55056 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms