Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.43■□□□□ 0.22
PSMD4P55036 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD4P55036 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD4P55036 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.43■□□□□ 0.22
PSMD4P55036 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD4P55036 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PSMD4P55036 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
PSMD4P55036 LINC00896-202ENST00000609602 2128 ntBASIC16.43■□□□□ 0.22
PSMD4P55036 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD4P55036 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PSMD4P55036 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.42■□□□□ 0.22
PSMD4P55036 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.42■□□□□ 0.22
PSMD4P55036 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PSMD4P55036 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PSMD4P55036 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PSMD4P55036 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PSMD4P55036 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 AC096633.1-201ENST00000422446 749 ntBASIC16.42■□□□□ 0.22
PSMD4P55036 DRAXINP1-201ENST00000437611 948 ntBASIC16.42■□□□□ 0.22
PSMD4P55036 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.42■□□□□ 0.22
PSMD4P55036 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
PSMD4P55036 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.42■□□□□ 0.22
PSMD4P55036 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PSMD4P55036 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.42■□□□□ 0.22
PSMD4P55036 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 AC009949.1-201ENST00000623048 1830 ntBASIC16.42■□□□□ 0.22
PSMD4P55036 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PSMD4P55036 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PSMD4P55036 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PSMD4P55036 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PSMD4P55036 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PSMD4P55036 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD4P55036 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD4P55036 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD4P55036 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD4P55036 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PSMD4P55036 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.41■□□□□ 0.22
PSMD4P55036 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD4P55036 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PSMD4P55036 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD4P55036 AC133963.1-201ENST00000504166 1679 ntBASIC16.41■□□□□ 0.22
PSMD4P55036 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.41■□□□□ 0.22
PSMD4P55036 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PSMD4P55036 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD4P55036 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.41■□□□□ 0.22
PSMD4P55036 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.41■□□□□ 0.22
PSMD4P55036 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.41■□□□□ 0.22
PSMD4P55036 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.41■□□□□ 0.22
PSMD4P55036 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.41■□□□□ 0.22
PSMD4P55036 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.41■□□□□ 0.22
PSMD4P55036 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PSMD4P55036 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.41■□□□□ 0.22
PSMD4P55036 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PSMD4P55036 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PSMD4P55036 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD4P55036 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD4P55036 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD4P55036 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PSMD4P55036 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD4P55036 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PSMD4P55036 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD4P55036 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.4■□□□□ 0.22
PSMD4P55036 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD4P55036 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD4P55036 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD4P55036 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD4P55036 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD4P55036 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
PSMD4P55036 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD4P55036 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PSMD4P55036 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.4■□□□□ 0.22
PSMD4P55036 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.4■□□□□ 0.22
PSMD4P55036 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.4■□□□□ 0.22
PSMD4P55036 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.4■□□□□ 0.22
PSMD4P55036 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD4P55036 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.4■□□□□ 0.22
PSMD4P55036 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.4■□□□□ 0.22
PSMD4P55036 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PSMD4P55036 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.4■□□□□ 0.22
PSMD4P55036 AP002414.4-201ENST00000589764 1148 ntBASIC16.4■□□□□ 0.22
PSMD4P55036 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.4■□□□□ 0.22
PSMD4P55036 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.4■□□□□ 0.22
PSMD4P55036 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.4■□□□□ 0.22
PSMD4P55036 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.4■□□□□ 0.22
PSMD4P55036 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.4■□□□□ 0.22
PSMD4P55036 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.4■□□□□ 0.22
PSMD4P55036 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms