Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNB3P54284 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.76■□□□□ 0.91
CACNB3P54284 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
CACNB3P54284 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNB3P54284 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNB3P54284 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.76■□□□□ 0.91
CACNB3P54284 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.76■□□□□ 0.91
CACNB3P54284 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.76■□□□□ 0.91
CACNB3P54284 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.76■□□□□ 0.91
CACNB3P54284 PDPK2P-202ENST00000562415 1191 ntBASIC20.76■□□□□ 0.91
CACNB3P54284 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.76■□□□□ 0.91
CACNB3P54284 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.76■□□□□ 0.91
CACNB3P54284 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.76■□□□□ 0.91
CACNB3P54284 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CACNB3P54284 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CACNB3P54284 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CACNB3P54284 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CACNB3P54284 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.76■□□□□ 0.91
CACNB3P54284 ELL2P1-201ENST00000413990 1906 ntBASIC20.76■□□□□ 0.91
CACNB3P54284 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CACNB3P54284 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
CACNB3P54284 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNB3P54284 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CACNB3P54284 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.76■□□□□ 0.91
CACNB3P54284 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.75■□□□□ 0.91
CACNB3P54284 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CACNB3P54284 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.75■□□□□ 0.91
CACNB3P54284 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.75■□□□□ 0.91
CACNB3P54284 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.75■□□□□ 0.91
CACNB3P54284 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 AP002414.1-201ENST00000391405 1147 ntBASIC20.75■□□□□ 0.91
CACNB3P54284 CNN2P11-201ENST00000429351 262 ntBASIC20.75■□□□□ 0.91
CACNB3P54284 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 LINC02084-201ENST00000606069 1096 ntBASIC20.75■□□□□ 0.91
CACNB3P54284 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.75■□□□□ 0.91
CACNB3P54284 AC025580.3-201ENST00000617932 1424 ntBASIC20.75■□□□□ 0.91
CACNB3P54284 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.75■□□□□ 0.91
CACNB3P54284 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.75■□□□□ 0.91
CACNB3P54284 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CACNB3P54284 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CACNB3P54284 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNB3P54284 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CACNB3P54284 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNB3P54284 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNB3P54284 AC254562.1-201ENST00000417586 456 ntBASIC20.74■□□□□ 0.91
CACNB3P54284 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNB3P54284 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNB3P54284 AC002558.1-201ENST00000488906 803 ntBASIC20.74■□□□□ 0.91
CACNB3P54284 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNB3P54284 AC096734.2-201ENST00000562054 433 ntBASIC20.74■□□□□ 0.91
CACNB3P54284 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.74■□□□□ 0.91
CACNB3P54284 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.74■□□□□ 0.91
CACNB3P54284 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.74■□□□□ 0.91
CACNB3P54284 PI4KAP1-204ENST00000612579 1703 ntBASIC20.74■□□□□ 0.91
CACNB3P54284 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.74■□□□□ 0.91
CACNB3P54284 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CACNB3P54284 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNB3P54284 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNB3P54284 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.74■□□□□ 0.91
CACNB3P54284 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNB3P54284 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNB3P54284 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CACNB3P54284 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CACNB3P54284 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNB3P54284 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CACNB3P54284 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNB3P54284 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CACNB3P54284 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNB3P54284 AC009113.1-201ENST00000570267 2443 ntBASIC20.73■□□□□ 0.91
CACNB3P54284 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNB3P54284 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.73■□□□□ 0.91
CACNB3P54284 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNB3P54284 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNB3P54284 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNB3P54284 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNB3P54284 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNB3P54284 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNB3P54284 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.73■□□□□ 0.91
CACNB3P54284 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNB3P54284 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNB3P54284 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.73■□□□□ 0.91
CACNB3P54284 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNB3P54284 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.73■□□□□ 0.91
CACNB3P54284 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CACNB3P54284 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CACNB3P54284 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNB3P54284 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms