Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
CLCN4P51793 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.45■□□□□ 0.54
CLCN4P51793 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLCN4P51793 AC009949.1-201ENST00000623048 1830 ntBASIC18.45■□□□□ 0.54
CLCN4P51793 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 AC097637.2-201ENST00000624096 1997 ntBASIC18.45■□□□□ 0.54
CLCN4P51793 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CLCN4P51793 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CLCN4P51793 PTCHD3P3-201ENST00000403073 906 ntBASIC18.45■□□□□ 0.54
CLCN4P51793 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.45■□□□□ 0.54
CLCN4P51793 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.45■□□□□ 0.54
CLCN4P51793 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCN4P51793 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.45■□□□□ 0.54
CLCN4P51793 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.45■□□□□ 0.54
CLCN4P51793 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 RFPL4AP1-201ENST00000530883 850 ntBASIC18.45■□□□□ 0.54
CLCN4P51793 PDPK2P-202ENST00000562415 1191 ntBASIC18.45■□□□□ 0.54
CLCN4P51793 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLCN4P51793 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CLCN4P51793 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.45■□□□□ 0.54
CLCN4P51793 AC010507.1-201ENST00000633895 436 ntBASIC18.45■□□□□ 0.54
CLCN4P51793 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 AC009336.1-201ENST00000608941 1553 ntBASIC18.45■□□□□ 0.54
CLCN4P51793 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.45■□□□□ 0.54
CLCN4P51793 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CLCN4P51793 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.45■□□□□ 0.54
CLCN4P51793 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCN4P51793 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.45■□□□□ 0.54
CLCN4P51793 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN4P51793 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCN4P51793 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCN4P51793 AC104581.1-202ENST00000635932 2618 ntBASIC18.44■□□□□ 0.54
CLCN4P51793 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLCN4P51793 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CLCN4P51793 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.44■□□□□ 0.54
CLCN4P51793 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.44■□□□□ 0.54
CLCN4P51793 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.44■□□□□ 0.54
CLCN4P51793 DDX43P3-201ENST00000441064 443 ntBASIC18.44■□□□□ 0.54
CLCN4P51793 CEND1P1-201ENST00000451006 455 ntBASIC18.44■□□□□ 0.54
CLCN4P51793 CYMP-203ENST00000474680 1263 ntBASIC18.44■□□□□ 0.54
CLCN4P51793 IGHV3-52-201ENST00000519770 353 ntBASIC18.44■□□□□ 0.54
CLCN4P51793 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCN4P51793 AC096734.2-201ENST00000562054 433 ntBASIC18.44■□□□□ 0.54
CLCN4P51793 AL353135.1-201ENST00000606729 504 ntBASIC18.44■□□□□ 0.54
CLCN4P51793 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 AC004877.2-201ENST00000623941 599 ntBASIC18.44■□□□□ 0.54
CLCN4P51793 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCN4P51793 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.44■□□□□ 0.54
CLCN4P51793 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
CLCN4P51793 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.44■□□□□ 0.54
CLCN4P51793 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN4P51793 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN4P51793 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
CLCN4P51793 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CLCN4P51793 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN4P51793 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CLCN4P51793 AP002414.1-201ENST00000391405 1147 ntBASIC18.43■□□□□ 0.54
CLCN4P51793 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CLCN4P51793 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLCN4P51793 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN4P51793 OR7E47P-204ENST00000575924 449 ntBASIC18.43■□□□□ 0.54
CLCN4P51793 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.43■□□□□ 0.54
CLCN4P51793 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.43■□□□□ 0.54
CLCN4P51793 GGTLC5P-201ENST00000617623 998 ntBASIC18.43■□□□□ 0.54
CLCN4P51793 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CLCN4P51793 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.43■□□□□ 0.54
CLCN4P51793 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN4P51793 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLCN4P51793 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN4P51793 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN4P51793 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN4P51793 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms