Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPT1AP50416 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPT1AP50416 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CPT1AP50416 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.42■□□□□ 0.7
CPT1AP50416 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.42■□□□□ 0.7
CPT1AP50416 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPT1AP50416 AC025580.3-201ENST00000617932 1424 ntBASIC19.42■□□□□ 0.7
CPT1AP50416 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
CPT1AP50416 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPT1AP50416 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CPT1AP50416 KRT18P55-202ENST00000578578 1546 ntBASIC19.41■□□□□ 0.7
CPT1AP50416 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPT1AP50416 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPT1AP50416 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.41■□□□□ 0.7
CPT1AP50416 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.41■□□□□ 0.7
CPT1AP50416 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPT1AP50416 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CPT1AP50416 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.41■□□□□ 0.7
CPT1AP50416 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPT1AP50416 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.41■□□□□ 0.7
CPT1AP50416 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.41■□□□□ 0.7
CPT1AP50416 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.41■□□□□ 0.7
CPT1AP50416 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.41■□□□□ 0.7
CPT1AP50416 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.41■□□□□ 0.7
CPT1AP50416 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.41■□□□□ 0.7
CPT1AP50416 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CPT1AP50416 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPT1AP50416 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CPT1AP50416 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CPT1AP50416 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.41■□□□□ 0.7
CPT1AP50416 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPT1AP50416 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.41■□□□□ 0.7
CPT1AP50416 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPT1AP50416 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPT1AP50416 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.4■□□□□ 0.7
CPT1AP50416 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPT1AP50416 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.4■□□□□ 0.7
CPT1AP50416 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.4■□□□□ 0.7
CPT1AP50416 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPT1AP50416 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPT1AP50416 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.4■□□□□ 0.7
CPT1AP50416 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.4■□□□□ 0.7
CPT1AP50416 RFPL4AP1-201ENST00000530883 850 ntBASIC19.4■□□□□ 0.7
CPT1AP50416 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.4■□□□□ 0.7
CPT1AP50416 AL031432.2-201ENST00000566714 459 ntBASIC19.4■□□□□ 0.7
CPT1AP50416 AL928711.1-201ENST00000570165 459 ntBASIC19.4■□□□□ 0.7
CPT1AP50416 AP002472.1-201ENST00000577490 586 ntBASIC19.4■□□□□ 0.7
CPT1AP50416 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.4■□□□□ 0.7
CPT1AP50416 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPT1AP50416 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPT1AP50416 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.4■□□□□ 0.7
CPT1AP50416 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPT1AP50416 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CPT1AP50416 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.4■□□□□ 0.7
CPT1AP50416 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.39■□□□□ 0.7
CPT1AP50416 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CPT1AP50416 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CPT1AP50416 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.39■□□□□ 0.7
CPT1AP50416 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CPT1AP50416 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.39■□□□□ 0.69
CPT1AP50416 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CPT1AP50416 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.39■□□□□ 0.69
CPT1AP50416 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CPT1AP50416 FAM58CP-201ENST00000435741 640 ntBASIC19.39■□□□□ 0.69
CPT1AP50416 CYMP-203ENST00000474680 1263 ntBASIC19.39■□□□□ 0.69
CPT1AP50416 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.39■□□□□ 0.69
CPT1AP50416 CXCL1P1-201ENST00000502804 216 ntBASIC19.39■□□□□ 0.69
CPT1AP50416 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.39■□□□□ 0.69
CPT1AP50416 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.39■□□□□ 0.69
CPT1AP50416 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 AL590787.1-201ENST00000568856 1315 ntBASIC19.39■□□□□ 0.69
CPT1AP50416 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.39■□□□□ 0.69
CPT1AP50416 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CPT1AP50416 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPT1AP50416 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.39■□□□□ 0.69
CPT1AP50416 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.39■□□□□ 0.69
CPT1AP50416 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.38■□□□□ 0.69
CPT1AP50416 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPT1AP50416 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CPT1AP50416 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPT1AP50416 FLJ13224-201ENST00000313737 1514 ntBASIC19.38■□□□□ 0.69
CPT1AP50416 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPT1AP50416 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPT1AP50416 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.38■□□□□ 0.69
CPT1AP50416 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPT1AP50416 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms