Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.79■□□□□ 0.28
PRIM2P49643 KRT18P65-201ENST00000439811 1286 ntBASIC16.79■□□□□ 0.28
PRIM2P49643 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRIM2P49643 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.79■□□□□ 0.28
PRIM2P49643 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.79■□□□□ 0.28
PRIM2P49643 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.79■□□□□ 0.28
PRIM2P49643 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.79■□□□□ 0.28
PRIM2P49643 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PRIM2P49643 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.79■□□□□ 0.28
PRIM2P49643 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.79■□□□□ 0.28
PRIM2P49643 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRIM2P49643 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRIM2P49643 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.79■□□□□ 0.28
PRIM2P49643 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRIM2P49643 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRIM2P49643 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PRIM2P49643 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.79■□□□□ 0.28
PRIM2P49643 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRIM2P49643 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRIM2P49643 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
PRIM2P49643 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRIM2P49643 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.79■□□□□ 0.28
PRIM2P49643 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRIM2P49643 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PRIM2P49643 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
PRIM2P49643 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.78■□□□□ 0.28
PRIM2P49643 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PRIM2P49643 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PRIM2P49643 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PRIM2P49643 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.78■□□□□ 0.28
PRIM2P49643 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.78■□□□□ 0.28
PRIM2P49643 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PRIM2P49643 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.78■□□□□ 0.28
PRIM2P49643 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.78■□□□□ 0.28
PRIM2P49643 ZNF444P1-201ENST00000559497 298 ntBASIC16.78■□□□□ 0.28
PRIM2P49643 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.78■□□□□ 0.28
PRIM2P49643 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.78■□□□□ 0.28
PRIM2P49643 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.78■□□□□ 0.28
PRIM2P49643 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.78■□□□□ 0.28
PRIM2P49643 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
PRIM2P49643 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
PRIM2P49643 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PRIM2P49643 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PRIM2P49643 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.78■□□□□ 0.28
PRIM2P49643 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRIM2P49643 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.78■□□□□ 0.28
PRIM2P49643 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.78■□□□□ 0.28
PRIM2P49643 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRIM2P49643 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRIM2P49643 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRIM2P49643 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.77■□□□□ 0.28
PRIM2P49643 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRIM2P49643 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRIM2P49643 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.77■□□□□ 0.28
PRIM2P49643 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRIM2P49643 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRIM2P49643 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRIM2P49643 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PRIM2P49643 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
PRIM2P49643 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRIM2P49643 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRIM2P49643 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRIM2P49643 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.77■□□□□ 0.28
PRIM2P49643 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.77■□□□□ 0.28
PRIM2P49643 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.77■□□□□ 0.28
PRIM2P49643 TMPOP1-202ENST00000424642 1267 ntBASIC16.77■□□□□ 0.28
PRIM2P49643 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRIM2P49643 AL359075.1-203ENST00000462729 1002 ntBASIC16.77■□□□□ 0.28
PRIM2P49643 AC092597.1-201ENST00000487352 616 ntBASIC16.77■□□□□ 0.28
PRIM2P49643 KRT18P21-201ENST00000515767 1272 ntBASIC16.77■□□□□ 0.28
PRIM2P49643 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.77■□□□□ 0.28
PRIM2P49643 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.77■□□□□ 0.28
PRIM2P49643 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms