Protein–RNA interactions for Protein: P43487

RANBP1, Ran-specific GTPase-activating protein, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1P43487 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.28■□□□□ 0.2
RANBP1P43487 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.28■□□□□ 0.2
RANBP1P43487 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.28■□□□□ 0.2
RANBP1P43487 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.28■□□□□ 0.2
RANBP1P43487 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RANBP1P43487 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RANBP1P43487 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
RANBP1P43487 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.28■□□□□ 0.2
RANBP1P43487 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.28■□□□□ 0.2
RANBP1P43487 AC087623.3-201ENST00000607047 1098 ntBASIC16.28■□□□□ 0.2
RANBP1P43487 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.28■□□□□ 0.2
RANBP1P43487 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.28■□□□□ 0.2
RANBP1P43487 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.28■□□□□ 0.2
RANBP1P43487 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.28■□□□□ 0.2
RANBP1P43487 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RANBP1P43487 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RANBP1P43487 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.28■□□□□ 0.2
RANBP1P43487 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RANBP1P43487 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RANBP1P43487 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.28■□□□□ 0.2
RANBP1P43487 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.28■□□□□ 0.2
RANBP1P43487 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.28■□□□□ 0.2
RANBP1P43487 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.28■□□□□ 0.2
RANBP1P43487 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RANBP1P43487 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RANBP1P43487 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.27■□□□□ 0.2
RANBP1P43487 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RANBP1P43487 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.27■□□□□ 0.2
RANBP1P43487 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RANBP1P43487 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.27■□□□□ 0.2
RANBP1P43487 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.27■□□□□ 0.2
RANBP1P43487 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RANBP1P43487 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RANBP1P43487 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RANBP1P43487 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RANBP1P43487 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.27■□□□□ 0.2
RANBP1P43487 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.27■□□□□ 0.2
RANBP1P43487 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.27■□□□□ 0.2
RANBP1P43487 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.27■□□□□ 0.2
RANBP1P43487 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.27■□□□□ 0.2
RANBP1P43487 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RANBP1P43487 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.27■□□□□ 0.2
RANBP1P43487 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.27■□□□□ 0.2
RANBP1P43487 AC006557.6-201ENST00000623071 864 ntBASIC16.27■□□□□ 0.2
RANBP1P43487 HLA-B-256ENST00000639848 1089 ntBASIC16.27■□□□□ 0.2
RANBP1P43487 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.27■□□□□ 0.2
RANBP1P43487 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.27■□□□□ 0.2
RANBP1P43487 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
RANBP1P43487 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RANBP1P43487 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.27■□□□□ 0.19
RANBP1P43487 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RANBP1P43487 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RANBP1P43487 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RANBP1P43487 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.27■□□□□ 0.19
RANBP1P43487 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
RANBP1P43487 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.27■□□□□ 0.19
RANBP1P43487 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RANBP1P43487 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.27■□□□□ 0.19
RANBP1P43487 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RANBP1P43487 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.27■□□□□ 0.19
RANBP1P43487 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RANBP1P43487 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.27■□□□□ 0.19
RANBP1P43487 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
RANBP1P43487 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RANBP1P43487 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RANBP1P43487 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
RANBP1P43487 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RANBP1P43487 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RANBP1P43487 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.26■□□□□ 0.19
RANBP1P43487 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RANBP1P43487 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RANBP1P43487 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.26■□□□□ 0.19
RANBP1P43487 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.26■□□□□ 0.19
RANBP1P43487 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.26■□□□□ 0.19
RANBP1P43487 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RANBP1P43487 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.26■□□□□ 0.19
RANBP1P43487 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RANBP1P43487 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms