Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.03■□□□□ 0.64
TNFSF9P41273 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.03■□□□□ 0.64
TNFSF9P41273 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TNFSF9P41273 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 SCARNA2-201ENST00000458748 420 ntBASIC19.03■□□□□ 0.64
TNFSF9P41273 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TNFSF9P41273 LINC01451-201ENST00000623792 534 ntBASIC19.03■□□□□ 0.64
TNFSF9P41273 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.03■□□□□ 0.64
TNFSF9P41273 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TNFSF9P41273 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF9P41273 HLA-A-201ENST00000376802 1334 ntBASIC19.02■□□□□ 0.64
TNFSF9P41273 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFSF9P41273 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF9P41273 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF9P41273 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TNFSF9P41273 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF9P41273 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.02■□□□□ 0.64
TNFSF9P41273 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFSF9P41273 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
TNFSF9P41273 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.02■□□□□ 0.64
TNFSF9P41273 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.02■□□□□ 0.64
TNFSF9P41273 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF9P41273 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.02■□□□□ 0.64
TNFSF9P41273 AC003669.1-201ENST00000334569 611 ntBASIC19.02■□□□□ 0.64
TNFSF9P41273 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TNFSF9P41273 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF9P41273 AL020989.1-201ENST00000422979 469 ntBASIC19.02■□□□□ 0.64
TNFSF9P41273 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF9P41273 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.02■□□□□ 0.64
TNFSF9P41273 RPS2P1-201ENST00000434010 821 ntBASIC19.02■□□□□ 0.64
TNFSF9P41273 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF9P41273 AC073648.2-201ENST00000510116 352 ntBASIC19.02■□□□□ 0.64
TNFSF9P41273 STK19B-204ENST00000512515 211 ntBASIC19.02■□□□□ 0.64
TNFSF9P41273 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFSF9P41273 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.02■□□□□ 0.64
TNFSF9P41273 MTDHP4-201ENST00000600287 670 ntBASIC19.02■□□□□ 0.64
TNFSF9P41273 AL049840.3-201ENST00000602669 611 ntBASIC19.02■□□□□ 0.64
TNFSF9P41273 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF9P41273 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TNFSF9P41273 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TNFSF9P41273 HLA-J-201ENST00000462773 1622 ntBASIC19.02■□□□□ 0.64
TNFSF9P41273 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
TNFSF9P41273 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
TNFSF9P41273 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF9P41273 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF9P41273 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.02■□□□□ 0.63
TNFSF9P41273 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
TNFSF9P41273 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TNFSF9P41273 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
TNFSF9P41273 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TNFSF9P41273 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF9P41273 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF9P41273 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFSF9P41273 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF9P41273 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF9P41273 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFSF9P41273 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.01■□□□□ 0.63
TNFSF9P41273 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
TNFSF9P41273 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF9P41273 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFSF9P41273 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF9P41273 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF9P41273 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF9P41273 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TNFSF9P41273 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFSF9P41273 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TNFSF9P41273 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TNFSF9P41273 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFSF9P41273 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF9P41273 AF186996.4-201ENST00000467186 377 ntBASIC19.01■□□□□ 0.63
TNFSF9P41273 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.01■□□□□ 0.63
TNFSF9P41273 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFSF9P41273 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFSF9P41273 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.01■□□□□ 0.63
TNFSF9P41273 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF9P41273 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TNFSF9P41273 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.01■□□□□ 0.63
TNFSF9P41273 AC009336.1-201ENST00000608941 1553 ntBASIC19.01■□□□□ 0.63
TNFSF9P41273 AC133963.1-201ENST00000504166 1679 ntBASIC19.01■□□□□ 0.63
TNFSF9P41273 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
TNFSF9P41273 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF9P41273 GNAS-203ENST00000306120 1878 ntBASIC19.01■□□□□ 0.63
TNFSF9P41273 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19■□□□□ 0.63
TNFSF9P41273 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TNFSF9P41273 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TNFSF9P41273 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFSF9P41273 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFSF9P41273 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFSF9P41273 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TNFSF9P41273 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TNFSF9P41273 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19■□□□□ 0.63
TNFSF9P41273 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19■□□□□ 0.63
TNFSF9P41273 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19■□□□□ 0.63
TNFSF9P41273 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19■□□□□ 0.63
TNFSF9P41273 AL773604.1-201ENST00000617417 272 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms