Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.94■□□□□ 0.94
COL4A5P29400 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL4A5P29400 TFAMP1-201ENST00000412727 736 ntBASIC20.94■□□□□ 0.94
COL4A5P29400 AC005237.2-201ENST00000434368 219 ntBASIC20.94■□□□□ 0.94
COL4A5P29400 SPDYE14P-201ENST00000442619 822 ntBASIC20.94■□□□□ 0.94
COL4A5P29400 AL592309.1-201ENST00000443127 649 ntBASIC20.94■□□□□ 0.94
COL4A5P29400 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.94■□□□□ 0.94
COL4A5P29400 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.94■□□□□ 0.94
COL4A5P29400 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.94■□□□□ 0.94
COL4A5P29400 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A5P29400 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.94■□□□□ 0.94
COL4A5P29400 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
COL4A5P29400 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A5P29400 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A5P29400 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A5P29400 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A5P29400 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.94■□□□□ 0.94
COL4A5P29400 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL4A5P29400 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A5P29400 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.93■□□□□ 0.94
COL4A5P29400 TUBB3P1-201ENST00000405796 1332 ntBASIC20.93■□□□□ 0.94
COL4A5P29400 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.93■□□□□ 0.94
COL4A5P29400 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A5P29400 MIR943-201ENST00000401286 94 ntBASIC20.93■□□□□ 0.94
COL4A5P29400 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.93■□□□□ 0.94
COL4A5P29400 TERF1P3-201ENST00000505638 1227 ntBASIC20.93■□□□□ 0.94
COL4A5P29400 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.93■□□□□ 0.94
COL4A5P29400 AP005018.1-201ENST00000525475 301 ntBASIC20.93■□□□□ 0.94
COL4A5P29400 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.93■□□□□ 0.94
COL4A5P29400 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COL4A5P29400 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.93■□□□□ 0.94
COL4A5P29400 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.93■□□□□ 0.94
COL4A5P29400 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.93■□□□□ 0.94
COL4A5P29400 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COL4A5P29400 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A5P29400 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
COL4A5P29400 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A5P29400 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A5P29400 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A5P29400 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A5P29400 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COL4A5P29400 GAPDHP21-201ENST00000450301 1010 ntBASIC20.93■□□□□ 0.94
COL4A5P29400 INGX-202ENST00000489074 768 ntBASIC20.93■□□□□ 0.94
COL4A5P29400 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.93■□□□□ 0.94
COL4A5P29400 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A5P29400 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.93■□□□□ 0.94
COL4A5P29400 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A5P29400 AL390754.1-201ENST00000619088 582 ntBASIC20.93■□□□□ 0.94
COL4A5P29400 AC008761.3-201ENST00000624803 892 ntBASIC20.93■□□□□ 0.94
COL4A5P29400 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.92■□□□□ 0.94
COL4A5P29400 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A5P29400 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.92■□□□□ 0.94
COL4A5P29400 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A5P29400 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.92■□□□□ 0.94
COL4A5P29400 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.92■□□□□ 0.94
COL4A5P29400 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.92■□□□□ 0.94
COL4A5P29400 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A5P29400 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
COL4A5P29400 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.92■□□□□ 0.94
COL4A5P29400 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A5P29400 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A5P29400 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A5P29400 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A5P29400 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A5P29400 AL671277.1-201ENST00000429656 993 ntBASIC20.92■□□□□ 0.94
COL4A5P29400 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
COL4A5P29400 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
COL4A5P29400 AC125807.1-201ENST00000483097 614 ntBASIC20.92■□□□□ 0.94
COL4A5P29400 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A5P29400 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.92■□□□□ 0.94
COL4A5P29400 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A5P29400 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.92■□□□□ 0.94
COL4A5P29400 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.92■□□□□ 0.94
COL4A5P29400 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A5P29400 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A5P29400 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.92■□□□□ 0.94
COL4A5P29400 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A5P29400 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.91■□□□□ 0.94
COL4A5P29400 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.91■□□□□ 0.94
COL4A5P29400 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
COL4A5P29400 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A5P29400 SPCS2P4-201ENST00000436160 681 ntBASIC20.91■□□□□ 0.94
COL4A5P29400 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.91■□□□□ 0.94
COL4A5P29400 RN7SL589P-201ENST00000481268 310 ntBASIC20.91■□□□□ 0.94
COL4A5P29400 DUX4L17-201ENST00000557360 1267 ntBASIC20.91■□□□□ 0.94
COL4A5P29400 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.91■□□□□ 0.94
COL4A5P29400 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.91■□□□□ 0.94
COL4A5P29400 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A5P29400 AC135776.1-201ENST00000319817 2481 ntBASIC20.91■□□□□ 0.94
COL4A5P29400 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A5P29400 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A5P29400 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A5P29400 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.91■□□□□ 0.94
COL4A5P29400 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COL4A5P29400 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A5P29400 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A5P29400 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A5P29400 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.9■□□□□ 0.94
COL4A5P29400 MYCLP1-201ENST00000372451 1075 ntBASIC20.9■□□□□ 0.94
COL4A5P29400 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms